Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32128 | 96607;96608;96609 | chr2:178543591;178543590;178543589 | chr2:179408318;179408317;179408316 |
N2AB | 30487 | 91684;91685;91686 | chr2:178543591;178543590;178543589 | chr2:179408318;179408317;179408316 |
N2A | 29560 | 88903;88904;88905 | chr2:178543591;178543590;178543589 | chr2:179408318;179408317;179408316 |
N2B | 23063 | 69412;69413;69414 | chr2:178543591;178543590;178543589 | chr2:179408318;179408317;179408316 |
Novex-1 | 23188 | 69787;69788;69789 | chr2:178543591;178543590;178543589 | chr2:179408318;179408317;179408316 |
Novex-2 | 23255 | 69988;69989;69990 | chr2:178543591;178543590;178543589 | chr2:179408318;179408317;179408316 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.002 | N | 0.288 | 0.149 | 0.458013479912 | gnomAD-4.0.0 | 1.60769E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.12558E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2262 | likely_benign | 0.2336 | benign | -1.654 | Destabilizing | 0.035 | N | 0.392 | neutral | None | None | None | None | N |
I/C | 0.5669 | likely_pathogenic | 0.5769 | pathogenic | -0.96 | Destabilizing | 0.824 | D | 0.561 | neutral | None | None | None | None | N |
I/D | 0.581 | likely_pathogenic | 0.5849 | pathogenic | -1.647 | Destabilizing | 0.38 | N | 0.621 | neutral | None | None | None | None | N |
I/E | 0.4765 | ambiguous | 0.5039 | ambiguous | -1.615 | Destabilizing | 0.38 | N | 0.606 | neutral | None | None | None | None | N |
I/F | 0.1727 | likely_benign | 0.1629 | benign | -1.15 | Destabilizing | 0.317 | N | 0.513 | neutral | N | 0.444522548 | None | None | N |
I/G | 0.5031 | ambiguous | 0.4966 | ambiguous | -1.965 | Destabilizing | 0.149 | N | 0.593 | neutral | None | None | None | None | N |
I/H | 0.4586 | ambiguous | 0.47 | ambiguous | -1.103 | Destabilizing | 0.935 | D | 0.593 | neutral | None | None | None | None | N |
I/K | 0.3265 | likely_benign | 0.3318 | benign | -1.277 | Destabilizing | 0.38 | N | 0.612 | neutral | None | None | None | None | N |
I/L | 0.0986 | likely_benign | 0.0991 | benign | -0.85 | Destabilizing | 0.012 | N | 0.308 | neutral | N | 0.409716541 | None | None | N |
I/M | 0.082 | likely_benign | 0.0818 | benign | -0.765 | Destabilizing | 0.317 | N | 0.513 | neutral | N | 0.407081667 | None | None | N |
I/N | 0.1951 | likely_benign | 0.1942 | benign | -1.16 | Destabilizing | 0.317 | N | 0.6 | neutral | N | 0.444002473 | None | None | N |
I/P | 0.2736 | likely_benign | 0.2961 | benign | -1.091 | Destabilizing | 0.555 | D | 0.599 | neutral | None | None | None | None | N |
I/Q | 0.3468 | ambiguous | 0.3635 | ambiguous | -1.313 | Destabilizing | 0.555 | D | 0.607 | neutral | None | None | None | None | N |
I/R | 0.315 | likely_benign | 0.3121 | benign | -0.673 | Destabilizing | 0.555 | D | 0.603 | neutral | None | None | None | None | N |
I/S | 0.2135 | likely_benign | 0.216 | benign | -1.626 | Destabilizing | 0.062 | N | 0.506 | neutral | N | 0.377316121 | None | None | N |
I/T | 0.1801 | likely_benign | 0.1916 | benign | -1.48 | Destabilizing | 0.002 | N | 0.288 | neutral | N | 0.381529862 | None | None | N |
I/V | 0.0724 | likely_benign | 0.072 | benign | -1.091 | Destabilizing | None | N | 0.117 | neutral | N | 0.372545019 | None | None | N |
I/W | 0.7666 | likely_pathogenic | 0.7537 | pathogenic | -1.243 | Destabilizing | 0.935 | D | 0.641 | neutral | None | None | None | None | N |
I/Y | 0.4436 | ambiguous | 0.4231 | ambiguous | -1.028 | Destabilizing | 0.555 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.