Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32136 | 96631;96632;96633 | chr2:178543567;178543566;178543565 | chr2:179408294;179408293;179408292 |
N2AB | 30495 | 91708;91709;91710 | chr2:178543567;178543566;178543565 | chr2:179408294;179408293;179408292 |
N2A | 29568 | 88927;88928;88929 | chr2:178543567;178543566;178543565 | chr2:179408294;179408293;179408292 |
N2B | 23071 | 69436;69437;69438 | chr2:178543567;178543566;178543565 | chr2:179408294;179408293;179408292 |
Novex-1 | 23196 | 69811;69812;69813 | chr2:178543567;178543566;178543565 | chr2:179408294;179408293;179408292 |
Novex-2 | 23263 | 70012;70013;70014 | chr2:178543567;178543566;178543565 | chr2:179408294;179408293;179408292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.98 | N | 0.551 | 0.379 | 0.33085137897 | gnomAD-4.0.0 | 1.37151E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79908E-06 | 0 | 0 |
P/S | rs1553518099 | None | 0.98 | N | 0.563 | 0.413 | 0.373357554552 | gnomAD-4.0.0 | 5.48604E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29679E-06 | 0 | 1.65782E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0811 | likely_benign | 0.0892 | benign | -0.597 | Destabilizing | 0.98 | D | 0.551 | neutral | N | 0.457030485 | None | None | I |
P/C | 0.6333 | likely_pathogenic | 0.6242 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
P/D | 0.7274 | likely_pathogenic | 0.7521 | pathogenic | -0.355 | Destabilizing | 0.985 | D | 0.541 | neutral | None | None | None | None | I |
P/E | 0.4813 | ambiguous | 0.5301 | ambiguous | -0.464 | Destabilizing | 0.97 | D | 0.564 | neutral | None | None | None | None | I |
P/F | 0.632 | likely_pathogenic | 0.6466 | pathogenic | -0.802 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/G | 0.4625 | ambiguous | 0.4922 | ambiguous | -0.758 | Destabilizing | 0.985 | D | 0.591 | neutral | None | None | None | None | I |
P/H | 0.3053 | likely_benign | 0.3026 | benign | -0.337 | Destabilizing | 0.041 | N | 0.294 | neutral | None | None | None | None | I |
P/I | 0.3274 | likely_benign | 0.3366 | benign | -0.319 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/K | 0.4888 | ambiguous | 0.496 | ambiguous | -0.444 | Destabilizing | 0.97 | D | 0.537 | neutral | None | None | None | None | I |
P/L | 0.1454 | likely_benign | 0.15 | benign | -0.319 | Destabilizing | 0.994 | D | 0.607 | neutral | N | 0.478818432 | None | None | I |
P/M | 0.3077 | likely_benign | 0.3219 | benign | -0.244 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
P/N | 0.4509 | ambiguous | 0.4736 | ambiguous | -0.131 | Destabilizing | 0.991 | D | 0.56 | neutral | None | None | None | None | I |
P/Q | 0.2241 | likely_benign | 0.2418 | benign | -0.395 | Destabilizing | 0.994 | D | 0.594 | neutral | N | 0.477297495 | None | None | I |
P/R | 0.3501 | ambiguous | 0.3489 | ambiguous | 0.096 | Stabilizing | 0.989 | D | 0.609 | neutral | N | 0.472132934 | None | None | I |
P/S | 0.1817 | likely_benign | 0.198 | benign | -0.523 | Destabilizing | 0.98 | D | 0.563 | neutral | N | 0.482221792 | None | None | I |
P/T | 0.1401 | likely_benign | 0.1513 | benign | -0.529 | Destabilizing | 0.994 | D | 0.515 | neutral | N | 0.471118976 | None | None | I |
P/V | 0.1991 | likely_benign | 0.2078 | benign | -0.375 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | I |
P/W | 0.8167 | likely_pathogenic | 0.8187 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
P/Y | 0.6 | likely_pathogenic | 0.6122 | pathogenic | -0.575 | Destabilizing | 0.991 | D | 0.643 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.