Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32144 | 96655;96656;96657 | chr2:178543543;178543542;178543541 | chr2:179408270;179408269;179408268 |
N2AB | 30503 | 91732;91733;91734 | chr2:178543543;178543542;178543541 | chr2:179408270;179408269;179408268 |
N2A | 29576 | 88951;88952;88953 | chr2:178543543;178543542;178543541 | chr2:179408270;179408269;179408268 |
N2B | 23079 | 69460;69461;69462 | chr2:178543543;178543542;178543541 | chr2:179408270;179408269;179408268 |
Novex-1 | 23204 | 69835;69836;69837 | chr2:178543543;178543542;178543541 | chr2:179408270;179408269;179408268 |
Novex-2 | 23271 | 70036;70037;70038 | chr2:178543543;178543542;178543541 | chr2:179408270;179408269;179408268 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs768078237 | -2.123 | 0.999 | N | 0.817 | 0.382 | 0.259272394797 | gnomAD-2.1.1 | 4.85E-05 | None | None | None | None | N | None | 1.29383E-04 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.03E-05 | 0 |
K/N | rs768078237 | -2.123 | 0.999 | N | 0.817 | 0.382 | 0.259272394797 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs768078237 | -2.123 | 0.999 | N | 0.817 | 0.382 | 0.259272394797 | gnomAD-4.0.0 | 2.85266E-05 | None | None | None | None | N | None | 2.66951E-05 | 0 | None | 0 | 0 | None | 0 | 1.64366E-04 | 3.56012E-05 | 1.09808E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9253 | likely_pathogenic | 0.9194 | pathogenic | -1.467 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
K/C | 0.8425 | likely_pathogenic | 0.8286 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
K/D | 0.9943 | likely_pathogenic | 0.994 | pathogenic | -2.311 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
K/E | 0.8699 | likely_pathogenic | 0.8667 | pathogenic | -1.975 | Destabilizing | 0.99 | D | 0.677 | prob.neutral | N | 0.496727968 | None | None | N |
K/F | 0.9662 | likely_pathogenic | 0.9547 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
K/G | 0.9631 | likely_pathogenic | 0.9522 | pathogenic | -1.955 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
K/H | 0.7459 | likely_pathogenic | 0.7268 | pathogenic | -1.582 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
K/I | 0.7696 | likely_pathogenic | 0.7834 | pathogenic | -0.052 | Destabilizing | 0.99 | D | 0.853 | deleterious | None | None | None | None | N |
K/L | 0.7476 | likely_pathogenic | 0.7379 | pathogenic | -0.052 | Destabilizing | 0.979 | D | 0.743 | deleterious | None | None | None | None | N |
K/M | 0.5401 | ambiguous | 0.5336 | ambiguous | -0.458 | Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.51671072 | None | None | N |
K/N | 0.9735 | likely_pathogenic | 0.971 | pathogenic | -1.928 | Destabilizing | 0.999 | D | 0.817 | deleterious | N | 0.514832223 | None | None | N |
K/P | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
K/Q | 0.452 | ambiguous | 0.4424 | ambiguous | -1.496 | Destabilizing | 0.993 | D | 0.815 | deleterious | N | 0.476977872 | None | None | N |
K/R | 0.1373 | likely_benign | 0.1233 | benign | -0.749 | Destabilizing | 0.314 | N | 0.423 | neutral | N | 0.488985401 | None | None | N |
K/S | 0.9596 | likely_pathogenic | 0.955 | pathogenic | -2.388 | Highly Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/T | 0.813 | likely_pathogenic | 0.8174 | pathogenic | -1.787 | Destabilizing | 0.999 | D | 0.776 | deleterious | N | 0.479331275 | None | None | N |
K/V | 0.7292 | likely_pathogenic | 0.7341 | pathogenic | -0.508 | Destabilizing | 0.992 | D | 0.785 | deleterious | None | None | None | None | N |
K/W | 0.9473 | likely_pathogenic | 0.9273 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
K/Y | 0.8715 | likely_pathogenic | 0.8482 | pathogenic | -0.46 | Destabilizing | 0.998 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.