Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32146 | 96661;96662;96663 | chr2:178543537;178543536;178543535 | chr2:179408264;179408263;179408262 |
N2AB | 30505 | 91738;91739;91740 | chr2:178543537;178543536;178543535 | chr2:179408264;179408263;179408262 |
N2A | 29578 | 88957;88958;88959 | chr2:178543537;178543536;178543535 | chr2:179408264;179408263;179408262 |
N2B | 23081 | 69466;69467;69468 | chr2:178543537;178543536;178543535 | chr2:179408264;179408263;179408262 |
Novex-1 | 23206 | 69841;69842;69843 | chr2:178543537;178543536;178543535 | chr2:179408264;179408263;179408262 |
Novex-2 | 23273 | 70042;70043;70044 | chr2:178543537;178543536;178543535 | chr2:179408264;179408263;179408262 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs1455005015 | -0.061 | 1.0 | N | 0.801 | 0.55 | 0.528260413467 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs1455005015 | -0.061 | 1.0 | N | 0.801 | 0.55 | 0.528260413467 | gnomAD-4.0.0 | 1.59367E-06 | None | None | None | None | N | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5377 | ambiguous | 0.5581 | ambiguous | -0.817 | Destabilizing | 0.999 | D | 0.619 | neutral | N | 0.46977585 | None | None | N |
E/C | 0.9805 | likely_pathogenic | 0.9811 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/D | 0.2809 | likely_benign | 0.2949 | benign | -1.342 | Destabilizing | 0.203 | N | 0.194 | neutral | N | 0.462262947 | None | None | N |
E/F | 0.9806 | likely_pathogenic | 0.9813 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
E/G | 0.6765 | likely_pathogenic | 0.6737 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.480335688 | None | None | N |
E/H | 0.9119 | likely_pathogenic | 0.9199 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/I | 0.8718 | likely_pathogenic | 0.887 | pathogenic | 0.317 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/K | 0.7147 | likely_pathogenic | 0.7332 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.523 | neutral | N | 0.50970739 | None | None | N |
E/L | 0.835 | likely_pathogenic | 0.8417 | pathogenic | 0.317 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/M | 0.8774 | likely_pathogenic | 0.886 | pathogenic | 0.805 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/N | 0.7444 | likely_pathogenic | 0.7524 | pathogenic | -1.391 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/P | 0.811 | likely_pathogenic | 0.8291 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
E/Q | 0.4934 | ambiguous | 0.5207 | ambiguous | -1.205 | Destabilizing | 1.0 | D | 0.635 | neutral | N | 0.469153512 | None | None | N |
E/R | 0.8351 | likely_pathogenic | 0.8476 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/S | 0.695 | likely_pathogenic | 0.7047 | pathogenic | -1.759 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
E/T | 0.7616 | likely_pathogenic | 0.7861 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/V | 0.6899 | likely_pathogenic | 0.7155 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.493667003 | None | None | N |
E/W | 0.9924 | likely_pathogenic | 0.9929 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
E/Y | 0.9632 | likely_pathogenic | 0.9655 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.