Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32150 | 96673;96674;96675 | chr2:178543525;178543524;178543523 | chr2:179408252;179408251;179408250 |
N2AB | 30509 | 91750;91751;91752 | chr2:178543525;178543524;178543523 | chr2:179408252;179408251;179408250 |
N2A | 29582 | 88969;88970;88971 | chr2:178543525;178543524;178543523 | chr2:179408252;179408251;179408250 |
N2B | 23085 | 69478;69479;69480 | chr2:178543525;178543524;178543523 | chr2:179408252;179408251;179408250 |
Novex-1 | 23210 | 69853;69854;69855 | chr2:178543525;178543524;178543523 | chr2:179408252;179408251;179408250 |
Novex-2 | 23277 | 70054;70055;70056 | chr2:178543525;178543524;178543523 | chr2:179408252;179408251;179408250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.98 | N | 0.53 | 0.316 | 0.336155897331 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8591 | likely_pathogenic | 0.8208 | pathogenic | -0.045 | Destabilizing | 0.931 | D | 0.483 | neutral | None | None | None | None | N |
R/C | 0.6648 | likely_pathogenic | 0.5563 | ambiguous | -0.34 | Destabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | N |
R/D | 0.9681 | likely_pathogenic | 0.9594 | pathogenic | -0.395 | Destabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | N |
R/E | 0.8578 | likely_pathogenic | 0.8292 | pathogenic | -0.373 | Destabilizing | 0.97 | D | 0.516 | neutral | None | None | None | None | N |
R/F | 0.9203 | likely_pathogenic | 0.8944 | pathogenic | -0.399 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
R/G | 0.7813 | likely_pathogenic | 0.6943 | pathogenic | -0.143 | Destabilizing | 0.98 | D | 0.497 | neutral | N | 0.428971518 | None | None | N |
R/H | 0.3958 | ambiguous | 0.3088 | benign | -0.602 | Destabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | N |
R/I | 0.79 | likely_pathogenic | 0.7249 | pathogenic | 0.169 | Stabilizing | 0.998 | D | 0.588 | neutral | N | 0.494564579 | None | None | N |
R/K | 0.2074 | likely_benign | 0.1731 | benign | -0.288 | Destabilizing | 0.122 | N | 0.2 | neutral | N | 0.411273979 | None | None | N |
R/L | 0.6195 | likely_pathogenic | 0.5458 | ambiguous | 0.169 | Stabilizing | 0.985 | D | 0.497 | neutral | None | None | None | None | N |
R/M | 0.7177 | likely_pathogenic | 0.6492 | pathogenic | -0.203 | Destabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | N |
R/N | 0.9416 | likely_pathogenic | 0.92 | pathogenic | -0.2 | Destabilizing | 0.985 | D | 0.52 | neutral | None | None | None | None | N |
R/P | 0.8962 | likely_pathogenic | 0.832 | pathogenic | 0.113 | Stabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
R/Q | 0.3614 | ambiguous | 0.2884 | benign | -0.224 | Destabilizing | 0.97 | D | 0.519 | neutral | None | None | None | None | N |
R/S | 0.9406 | likely_pathogenic | 0.9153 | pathogenic | -0.33 | Destabilizing | 0.961 | D | 0.508 | neutral | N | 0.446482631 | None | None | N |
R/T | 0.8349 | likely_pathogenic | 0.7715 | pathogenic | -0.224 | Destabilizing | 0.98 | D | 0.53 | neutral | N | 0.466415186 | None | None | N |
R/V | 0.8119 | likely_pathogenic | 0.7557 | pathogenic | 0.113 | Stabilizing | 0.996 | D | 0.535 | neutral | None | None | None | None | N |
R/W | 0.614 | likely_pathogenic | 0.5134 | ambiguous | -0.621 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
R/Y | 0.8147 | likely_pathogenic | 0.7594 | pathogenic | -0.244 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.