Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32152 | 96679;96680;96681 | chr2:178543519;178543518;178543517 | chr2:179408246;179408245;179408244 |
N2AB | 30511 | 91756;91757;91758 | chr2:178543519;178543518;178543517 | chr2:179408246;179408245;179408244 |
N2A | 29584 | 88975;88976;88977 | chr2:178543519;178543518;178543517 | chr2:179408246;179408245;179408244 |
N2B | 23087 | 69484;69485;69486 | chr2:178543519;178543518;178543517 | chr2:179408246;179408245;179408244 |
Novex-1 | 23212 | 69859;69860;69861 | chr2:178543519;178543518;178543517 | chr2:179408246;179408245;179408244 |
Novex-2 | 23279 | 70060;70061;70062 | chr2:178543519;178543518;178543517 | chr2:179408246;179408245;179408244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.349 | N | 0.451 | 0.344 | 0.417081434665 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
F/V | None | None | 0.722 | N | 0.405 | 0.319 | 0.591140946133 | gnomAD-4.0.0 | 1.59214E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9842 | likely_pathogenic | 0.9867 | pathogenic | -2.424 | Highly Destabilizing | 0.775 | D | 0.465 | neutral | None | None | None | None | I |
F/C | 0.9168 | likely_pathogenic | 0.9231 | pathogenic | -1.082 | Destabilizing | 0.995 | D | 0.55 | neutral | N | 0.510283393 | None | None | I |
F/D | 0.9935 | likely_pathogenic | 0.9949 | pathogenic | -1.22 | Destabilizing | 0.987 | D | 0.585 | neutral | None | None | None | None | I |
F/E | 0.9969 | likely_pathogenic | 0.9977 | pathogenic | -1.143 | Destabilizing | 0.961 | D | 0.562 | neutral | None | None | None | None | I |
F/G | 0.9896 | likely_pathogenic | 0.9911 | pathogenic | -2.739 | Highly Destabilizing | 0.961 | D | 0.51 | neutral | None | None | None | None | I |
F/H | 0.9099 | likely_pathogenic | 0.9311 | pathogenic | -0.839 | Destabilizing | 0.923 | D | 0.484 | neutral | None | None | None | None | I |
F/I | 0.9569 | likely_pathogenic | 0.9601 | pathogenic | -1.469 | Destabilizing | 0.722 | D | 0.431 | neutral | N | 0.480307203 | None | None | I |
F/K | 0.9973 | likely_pathogenic | 0.998 | pathogenic | -1.076 | Destabilizing | 0.923 | D | 0.569 | neutral | None | None | None | None | I |
F/L | 0.9932 | likely_pathogenic | 0.9931 | pathogenic | -1.469 | Destabilizing | 0.349 | N | 0.451 | neutral | N | 0.471802363 | None | None | I |
F/M | 0.9682 | likely_pathogenic | 0.9694 | pathogenic | -1.094 | Destabilizing | 0.987 | D | 0.453 | neutral | None | None | None | None | I |
F/N | 0.974 | likely_pathogenic | 0.9805 | pathogenic | -1.071 | Destabilizing | 0.961 | D | 0.585 | neutral | None | None | None | None | I |
F/P | 0.996 | likely_pathogenic | 0.9972 | pathogenic | -1.783 | Destabilizing | 0.987 | D | 0.588 | neutral | None | None | None | None | I |
F/Q | 0.9916 | likely_pathogenic | 0.9936 | pathogenic | -1.253 | Destabilizing | 0.961 | D | 0.587 | neutral | None | None | None | None | I |
F/R | 0.9917 | likely_pathogenic | 0.9935 | pathogenic | -0.307 | Destabilizing | 0.961 | D | 0.591 | neutral | None | None | None | None | I |
F/S | 0.9575 | likely_pathogenic | 0.9645 | pathogenic | -1.886 | Destabilizing | 0.901 | D | 0.467 | neutral | N | 0.471108929 | None | None | I |
F/T | 0.9871 | likely_pathogenic | 0.9897 | pathogenic | -1.727 | Destabilizing | 0.961 | D | 0.484 | neutral | None | None | None | None | I |
F/V | 0.9411 | likely_pathogenic | 0.948 | pathogenic | -1.783 | Destabilizing | 0.722 | D | 0.405 | neutral | N | 0.491004199 | None | None | I |
F/W | 0.3142 | likely_benign | 0.3433 | ambiguous | -0.488 | Destabilizing | 0.961 | D | 0.461 | neutral | None | None | None | None | I |
F/Y | 0.128 | likely_benign | 0.1393 | benign | -0.69 | Destabilizing | 0.001 | N | 0.114 | neutral | N | 0.386455679 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.