Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32164 | 96715;96716;96717 | chr2:178543483;178543482;178543481 | chr2:179408210;179408209;179408208 |
N2AB | 30523 | 91792;91793;91794 | chr2:178543483;178543482;178543481 | chr2:179408210;179408209;179408208 |
N2A | 29596 | 89011;89012;89013 | chr2:178543483;178543482;178543481 | chr2:179408210;179408209;179408208 |
N2B | 23099 | 69520;69521;69522 | chr2:178543483;178543482;178543481 | chr2:179408210;179408209;179408208 |
Novex-1 | 23224 | 69895;69896;69897 | chr2:178543483;178543482;178543481 | chr2:179408210;179408209;179408208 |
Novex-2 | 23291 | 70096;70097;70098 | chr2:178543483;178543482;178543481 | chr2:179408210;179408209;179408208 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1374040247 | -1.343 | 0.99 | N | 0.545 | 0.491 | 0.390531646278 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
Y/H | rs1374040247 | -1.343 | 0.99 | N | 0.545 | 0.491 | 0.390531646278 | gnomAD-4.0.0 | 3.18287E-06 | None | None | None | None | N | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 2.85837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7144 | likely_pathogenic | 0.6296 | pathogenic | -2.35 | Highly Destabilizing | 0.86 | D | 0.571 | neutral | None | None | None | None | N |
Y/C | 0.1281 | likely_benign | 0.0968 | benign | -1.379 | Destabilizing | 0.997 | D | 0.724 | prob.delet. | N | 0.433905696 | None | None | N |
Y/D | 0.8733 | likely_pathogenic | 0.8281 | pathogenic | -1.958 | Destabilizing | 0.99 | D | 0.735 | prob.delet. | N | 0.499671392 | None | None | N |
Y/E | 0.9153 | likely_pathogenic | 0.8887 | pathogenic | -1.791 | Destabilizing | 0.993 | D | 0.683 | prob.neutral | None | None | None | None | N |
Y/F | 0.0691 | likely_benign | 0.0698 | benign | -0.684 | Destabilizing | 0.014 | N | 0.22 | neutral | N | 0.430459959 | None | None | N |
Y/G | 0.7185 | likely_pathogenic | 0.6409 | pathogenic | -2.731 | Highly Destabilizing | 0.978 | D | 0.66 | neutral | None | None | None | None | N |
Y/H | 0.2494 | likely_benign | 0.2273 | benign | -1.186 | Destabilizing | 0.99 | D | 0.545 | neutral | N | 0.491817849 | None | None | N |
Y/I | 0.5845 | likely_pathogenic | 0.521 | ambiguous | -1.14 | Destabilizing | 0.754 | D | 0.525 | neutral | None | None | None | None | N |
Y/K | 0.894 | likely_pathogenic | 0.861 | pathogenic | -1.801 | Destabilizing | 0.978 | D | 0.685 | prob.neutral | None | None | None | None | N |
Y/L | 0.4231 | ambiguous | 0.3704 | ambiguous | -1.14 | Destabilizing | 0.019 | N | 0.473 | neutral | None | None | None | None | N |
Y/M | 0.6433 | likely_pathogenic | 0.6018 | pathogenic | -0.919 | Destabilizing | 0.956 | D | 0.669 | neutral | None | None | None | None | N |
Y/N | 0.6082 | likely_pathogenic | 0.5389 | ambiguous | -2.482 | Highly Destabilizing | 0.99 | D | 0.703 | prob.neutral | N | 0.499417902 | None | None | N |
Y/P | 0.9833 | likely_pathogenic | 0.9738 | pathogenic | -1.547 | Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | N |
Y/Q | 0.7269 | likely_pathogenic | 0.6756 | pathogenic | -2.235 | Highly Destabilizing | 0.993 | D | 0.658 | neutral | None | None | None | None | N |
Y/R | 0.786 | likely_pathogenic | 0.7266 | pathogenic | -1.569 | Destabilizing | 0.978 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/S | 0.514 | ambiguous | 0.4245 | ambiguous | -2.903 | Highly Destabilizing | 0.97 | D | 0.624 | neutral | N | 0.487808107 | None | None | N |
Y/T | 0.7369 | likely_pathogenic | 0.6671 | pathogenic | -2.625 | Highly Destabilizing | 0.978 | D | 0.629 | neutral | None | None | None | None | N |
Y/V | 0.4897 | ambiguous | 0.4201 | ambiguous | -1.547 | Destabilizing | 0.754 | D | 0.51 | neutral | None | None | None | None | N |
Y/W | 0.3785 | ambiguous | 0.3779 | ambiguous | -0.153 | Destabilizing | 0.998 | D | 0.554 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.