Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32166 | 96721;96722;96723 | chr2:178543477;178543476;178543475 | chr2:179408204;179408203;179408202 |
N2AB | 30525 | 91798;91799;91800 | chr2:178543477;178543476;178543475 | chr2:179408204;179408203;179408202 |
N2A | 29598 | 89017;89018;89019 | chr2:178543477;178543476;178543475 | chr2:179408204;179408203;179408202 |
N2B | 23101 | 69526;69527;69528 | chr2:178543477;178543476;178543475 | chr2:179408204;179408203;179408202 |
Novex-1 | 23226 | 69901;69902;69903 | chr2:178543477;178543476;178543475 | chr2:179408204;179408203;179408202 |
Novex-2 | 23293 | 70102;70103;70104 | chr2:178543477;178543476;178543475 | chr2:179408204;179408203;179408202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs746467659 | -1.091 | 0.006 | N | 0.185 | 0.056 | 0.485275477626 | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.08261E-04 | None | 0 | None | 0 | 0 | 0 |
I/V | rs746467659 | -1.091 | 0.006 | N | 0.185 | 0.056 | 0.485275477626 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs746467659 | -1.091 | 0.006 | N | 0.185 | 0.056 | 0.485275477626 | gnomAD-4.0.0 | 2.5622E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.85084E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9066 | likely_pathogenic | 0.8927 | pathogenic | -2.196 | Highly Destabilizing | 0.754 | D | 0.732 | prob.delet. | None | None | None | None | N |
I/C | 0.9037 | likely_pathogenic | 0.8895 | pathogenic | -1.506 | Destabilizing | 0.994 | D | 0.751 | deleterious | None | None | None | None | N |
I/D | 0.9959 | likely_pathogenic | 0.9948 | pathogenic | -2.651 | Highly Destabilizing | 0.993 | D | 0.852 | deleterious | None | None | None | None | N |
I/E | 0.9895 | likely_pathogenic | 0.9878 | pathogenic | -2.333 | Highly Destabilizing | 0.978 | D | 0.853 | deleterious | None | None | None | None | N |
I/F | 0.4691 | ambiguous | 0.4427 | ambiguous | -1.316 | Destabilizing | 0.942 | D | 0.743 | deleterious | N | 0.471724406 | None | None | N |
I/G | 0.986 | likely_pathogenic | 0.9837 | pathogenic | -2.811 | Highly Destabilizing | 0.978 | D | 0.848 | deleterious | None | None | None | None | N |
I/H | 0.9821 | likely_pathogenic | 0.9791 | pathogenic | -2.589 | Highly Destabilizing | 0.998 | D | 0.836 | deleterious | None | None | None | None | N |
I/K | 0.9849 | likely_pathogenic | 0.9835 | pathogenic | -1.6 | Destabilizing | 0.978 | D | 0.852 | deleterious | None | None | None | None | N |
I/L | 0.2492 | likely_benign | 0.2371 | benign | -0.376 | Destabilizing | 0.294 | N | 0.403 | neutral | N | 0.498370101 | None | None | N |
I/M | 0.347 | ambiguous | 0.3305 | benign | -0.515 | Destabilizing | 0.942 | D | 0.713 | prob.delet. | N | 0.493124025 | None | None | N |
I/N | 0.9572 | likely_pathogenic | 0.9508 | pathogenic | -2.243 | Highly Destabilizing | 0.99 | D | 0.85 | deleterious | N | 0.516343615 | None | None | N |
I/P | 0.9859 | likely_pathogenic | 0.983 | pathogenic | -0.969 | Destabilizing | 0.993 | D | 0.849 | deleterious | None | None | None | None | N |
I/Q | 0.9821 | likely_pathogenic | 0.9806 | pathogenic | -1.873 | Destabilizing | 0.993 | D | 0.863 | deleterious | None | None | None | None | N |
I/R | 0.9804 | likely_pathogenic | 0.9775 | pathogenic | -1.789 | Destabilizing | 0.978 | D | 0.856 | deleterious | None | None | None | None | N |
I/S | 0.9518 | likely_pathogenic | 0.944 | pathogenic | -2.879 | Highly Destabilizing | 0.942 | D | 0.811 | deleterious | N | 0.515836636 | None | None | N |
I/T | 0.9368 | likely_pathogenic | 0.9293 | pathogenic | -2.381 | Highly Destabilizing | 0.822 | D | 0.756 | deleterious | N | 0.498150454 | None | None | N |
I/V | 0.1117 | likely_benign | 0.1083 | benign | -0.969 | Destabilizing | 0.006 | N | 0.185 | neutral | N | 0.431185104 | None | None | N |
I/W | 0.9871 | likely_pathogenic | 0.982 | pathogenic | -1.718 | Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
I/Y | 0.9281 | likely_pathogenic | 0.9159 | pathogenic | -1.386 | Destabilizing | 0.978 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.