Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32169 | 96730;96731;96732 | chr2:178543468;178543467;178543466 | chr2:179408195;179408194;179408193 |
N2AB | 30528 | 91807;91808;91809 | chr2:178543468;178543467;178543466 | chr2:179408195;179408194;179408193 |
N2A | 29601 | 89026;89027;89028 | chr2:178543468;178543467;178543466 | chr2:179408195;179408194;179408193 |
N2B | 23104 | 69535;69536;69537 | chr2:178543468;178543467;178543466 | chr2:179408195;179408194;179408193 |
Novex-1 | 23229 | 69910;69911;69912 | chr2:178543468;178543467;178543466 | chr2:179408195;179408194;179408193 |
Novex-2 | 23296 | 70111;70112;70113 | chr2:178543468;178543467;178543466 | chr2:179408195;179408194;179408193 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.868 | 0.71 | 0.842498291583 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8931 | likely_pathogenic | 0.8848 | pathogenic | -2.438 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/C | 0.8764 | likely_pathogenic | 0.8721 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/D | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -2.147 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/E | 0.9953 | likely_pathogenic | 0.994 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/F | 0.8363 | likely_pathogenic | 0.8317 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.868 | deleterious | D | 0.631080202 | None | None | N |
L/G | 0.9817 | likely_pathogenic | 0.9787 | pathogenic | -2.973 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9909 | likely_pathogenic | 0.9876 | pathogenic | -2.345 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.647906781 | None | None | N |
L/I | 0.2806 | likely_benign | 0.2979 | benign | -0.904 | Destabilizing | 0.995 | D | 0.839 | deleterious | D | 0.630071181 | None | None | N |
L/K | 0.9923 | likely_pathogenic | 0.9913 | pathogenic | -1.718 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
L/M | 0.3933 | ambiguous | 0.418 | ambiguous | -1.069 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/N | 0.9894 | likely_pathogenic | 0.9866 | pathogenic | -2.042 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/P | 0.9884 | likely_pathogenic | 0.984 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.647906781 | None | None | N |
L/Q | 0.9807 | likely_pathogenic | 0.9763 | pathogenic | -1.908 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/R | 0.984 | likely_pathogenic | 0.9809 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.63188742 | None | None | N |
L/S | 0.9855 | likely_pathogenic | 0.9821 | pathogenic | -2.875 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/T | 0.9044 | likely_pathogenic | 0.8942 | pathogenic | -2.494 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/V | 0.2806 | likely_benign | 0.3134 | benign | -1.394 | Destabilizing | 0.996 | D | 0.848 | deleterious | D | 0.577480528 | None | None | N |
L/W | 0.9834 | likely_pathogenic | 0.9799 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
L/Y | 0.9863 | likely_pathogenic | 0.9855 | pathogenic | -1.586 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.