Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32171 | 96736;96737;96738 | chr2:178543462;178543461;178543460 | chr2:179408189;179408188;179408187 |
N2AB | 30530 | 91813;91814;91815 | chr2:178543462;178543461;178543460 | chr2:179408189;179408188;179408187 |
N2A | 29603 | 89032;89033;89034 | chr2:178543462;178543461;178543460 | chr2:179408189;179408188;179408187 |
N2B | 23106 | 69541;69542;69543 | chr2:178543462;178543461;178543460 | chr2:179408189;179408188;179408187 |
Novex-1 | 23231 | 69916;69917;69918 | chr2:178543462;178543461;178543460 | chr2:179408189;179408188;179408187 |
Novex-2 | 23298 | 70117;70118;70119 | chr2:178543462;178543461;178543460 | chr2:179408189;179408188;179408187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs778618339 | 0.048 | 0.984 | N | 0.607 | 0.326 | 0.345175991111 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs778618339 | 0.048 | 0.984 | N | 0.607 | 0.326 | 0.345175991111 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85829E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2637 | likely_benign | 0.3024 | benign | -0.476 | Destabilizing | 0.985 | D | 0.615 | neutral | N | 0.469100606 | None | None | N |
E/C | 0.9442 | likely_pathogenic | 0.9527 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/D | 0.6204 | likely_pathogenic | 0.6383 | pathogenic | -0.372 | Destabilizing | 0.945 | D | 0.545 | neutral | N | 0.492070387 | None | None | N |
E/F | 0.9733 | likely_pathogenic | 0.9771 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/G | 0.5275 | ambiguous | 0.548 | ambiguous | -0.683 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.483107165 | None | None | N |
E/H | 0.891 | likely_pathogenic | 0.905 | pathogenic | -0.087 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/I | 0.7529 | likely_pathogenic | 0.776 | pathogenic | 0.039 | Stabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/K | 0.5276 | ambiguous | 0.5393 | ambiguous | 0.415 | Stabilizing | 0.984 | D | 0.607 | neutral | N | 0.467191729 | None | None | N |
E/L | 0.8302 | likely_pathogenic | 0.8546 | pathogenic | 0.039 | Stabilizing | 0.998 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/M | 0.8097 | likely_pathogenic | 0.8299 | pathogenic | 0.173 | Stabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/N | 0.7709 | likely_pathogenic | 0.7784 | pathogenic | -0.021 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/P | 0.5233 | ambiguous | 0.5471 | ambiguous | -0.113 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/Q | 0.2916 | likely_benign | 0.3134 | benign | 0.017 | Stabilizing | 0.887 | D | 0.307 | neutral | D | 0.522348613 | None | None | N |
E/R | 0.6578 | likely_pathogenic | 0.6753 | pathogenic | 0.59 | Stabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/S | 0.5089 | ambiguous | 0.5429 | ambiguous | -0.163 | Destabilizing | 0.989 | D | 0.662 | neutral | None | None | None | None | N |
E/T | 0.5714 | likely_pathogenic | 0.632 | pathogenic | 0.014 | Stabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/V | 0.5408 | ambiguous | 0.5875 | pathogenic | -0.113 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | N | 0.473966132 | None | None | N |
E/W | 0.9934 | likely_pathogenic | 0.9938 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/Y | 0.9581 | likely_pathogenic | 0.9662 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.