Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32173 | 96742;96743;96744 | chr2:178543456;178543455;178543454 | chr2:179408183;179408182;179408181 |
N2AB | 30532 | 91819;91820;91821 | chr2:178543456;178543455;178543454 | chr2:179408183;179408182;179408181 |
N2A | 29605 | 89038;89039;89040 | chr2:178543456;178543455;178543454 | chr2:179408183;179408182;179408181 |
N2B | 23108 | 69547;69548;69549 | chr2:178543456;178543455;178543454 | chr2:179408183;179408182;179408181 |
Novex-1 | 23233 | 69922;69923;69924 | chr2:178543456;178543455;178543454 | chr2:179408183;179408182;179408181 |
Novex-2 | 23300 | 70123;70124;70125 | chr2:178543456;178543455;178543454 | chr2:179408183;179408182;179408181 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs770726467 | 0.15 | None | N | 0.213 | 0.139 | 0.403040389579 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
T/I | rs770726467 | 0.15 | None | N | 0.213 | 0.139 | 0.403040389579 | gnomAD-4.0.0 | 3.42111E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.79656E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0724 | likely_benign | 0.0666 | benign | -0.931 | Destabilizing | None | N | 0.061 | neutral | N | 0.468578417 | None | None | N |
T/C | 0.2918 | likely_benign | 0.2728 | benign | -0.487 | Destabilizing | 0.356 | N | 0.417 | neutral | None | None | None | None | N |
T/D | 0.4842 | ambiguous | 0.4187 | ambiguous | -0.415 | Destabilizing | 0.072 | N | 0.448 | neutral | None | None | None | None | N |
T/E | 0.3611 | ambiguous | 0.3191 | benign | -0.305 | Destabilizing | 0.072 | N | 0.391 | neutral | None | None | None | None | N |
T/F | 0.3147 | likely_benign | 0.2389 | benign | -0.714 | Destabilizing | 0.214 | N | 0.458 | neutral | None | None | None | None | N |
T/G | 0.1923 | likely_benign | 0.1708 | benign | -1.287 | Destabilizing | 0.016 | N | 0.325 | neutral | None | None | None | None | N |
T/H | 0.2764 | likely_benign | 0.2575 | benign | -1.379 | Destabilizing | 0.628 | D | 0.417 | neutral | None | None | None | None | N |
T/I | 0.1824 | likely_benign | 0.1575 | benign | -0.034 | Destabilizing | None | N | 0.213 | neutral | N | 0.495458374 | None | None | N |
T/K | 0.2518 | likely_benign | 0.2193 | benign | -0.532 | Destabilizing | 0.072 | N | 0.392 | neutral | None | None | None | None | N |
T/L | 0.1145 | likely_benign | 0.0966 | benign | -0.034 | Destabilizing | None | N | 0.131 | neutral | None | None | None | None | N |
T/M | 0.0886 | likely_benign | 0.0783 | benign | 0.014 | Stabilizing | 0.002 | N | 0.227 | neutral | None | None | None | None | N |
T/N | 0.1103 | likely_benign | 0.1051 | benign | -0.836 | Destabilizing | 0.055 | N | 0.39 | neutral | N | 0.434236557 | None | None | N |
T/P | 0.6895 | likely_pathogenic | 0.6331 | pathogenic | -0.3 | Destabilizing | 0.055 | N | 0.464 | neutral | N | 0.490244551 | None | None | N |
T/Q | 0.2034 | likely_benign | 0.195 | benign | -0.763 | Destabilizing | 0.214 | N | 0.454 | neutral | None | None | None | None | N |
T/R | 0.2313 | likely_benign | 0.1948 | benign | -0.511 | Destabilizing | 0.214 | N | 0.459 | neutral | None | None | None | None | N |
T/S | 0.0932 | likely_benign | 0.0899 | benign | -1.143 | Destabilizing | 0.002 | N | 0.151 | neutral | N | 0.457091987 | None | None | N |
T/V | 0.1203 | likely_benign | 0.1074 | benign | -0.3 | Destabilizing | None | N | 0.058 | neutral | None | None | None | None | N |
T/W | 0.6749 | likely_pathogenic | 0.6036 | pathogenic | -0.757 | Destabilizing | 0.864 | D | 0.419 | neutral | None | None | None | None | N |
T/Y | 0.3332 | likely_benign | 0.2923 | benign | -0.445 | Destabilizing | 0.356 | N | 0.457 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.