Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3218 | 9877;9878;9879 | chr2:178766432;178766431;178766430 | chr2:179631159;179631158;179631157 |
N2AB | 3218 | 9877;9878;9879 | chr2:178766432;178766431;178766430 | chr2:179631159;179631158;179631157 |
N2A | 3218 | 9877;9878;9879 | chr2:178766432;178766431;178766430 | chr2:179631159;179631158;179631157 |
N2B | 3172 | 9739;9740;9741 | chr2:178766432;178766431;178766430 | chr2:179631159;179631158;179631157 |
Novex-1 | 3172 | 9739;9740;9741 | chr2:178766432;178766431;178766430 | chr2:179631159;179631158;179631157 |
Novex-2 | 3172 | 9739;9740;9741 | chr2:178766432;178766431;178766430 | chr2:179631159;179631158;179631157 |
Novex-3 | 3218 | 9877;9878;9879 | chr2:178766432;178766431;178766430 | chr2:179631159;179631158;179631157 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.999 | D | 0.871 | 0.428 | 0.37281450598 | gnomAD-4.0.0 | 6.8408E-07 | None | None | None | None | N | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/S | None | None | 0.989 | D | 0.881 | 0.411 | 0.495970961353 | gnomAD-4.0.0 | 6.8408E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -3.193 | Highly Destabilizing | 0.944 | D | 0.836 | deleterious | None | None | None | None | N |
Y/C | 0.992 | likely_pathogenic | 0.9937 | pathogenic | -2.343 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | D | 0.529891844 | None | None | N |
Y/D | 0.9987 | likely_pathogenic | 0.9994 | pathogenic | -3.711 | Highly Destabilizing | 0.996 | D | 0.881 | deleterious | D | 0.529891844 | None | None | N |
Y/E | 0.9996 | likely_pathogenic | 0.9998 | pathogenic | -3.491 | Highly Destabilizing | 0.997 | D | 0.882 | deleterious | None | None | None | None | N |
Y/F | 0.4328 | ambiguous | 0.4417 | ambiguous | -1.176 | Destabilizing | 0.039 | N | 0.413 | neutral | N | 0.40983847 | None | None | N |
Y/G | 0.9965 | likely_pathogenic | 0.9975 | pathogenic | -3.64 | Highly Destabilizing | 0.992 | D | 0.886 | deleterious | None | None | None | None | N |
Y/H | 0.995 | likely_pathogenic | 0.9968 | pathogenic | -2.386 | Highly Destabilizing | 0.996 | D | 0.733 | prob.delet. | D | 0.529891844 | None | None | N |
Y/I | 0.9733 | likely_pathogenic | 0.9766 | pathogenic | -1.7 | Destabilizing | 0.968 | D | 0.819 | deleterious | None | None | None | None | N |
Y/K | 0.9994 | likely_pathogenic | 0.9997 | pathogenic | -2.43 | Highly Destabilizing | 0.992 | D | 0.883 | deleterious | None | None | None | None | N |
Y/L | 0.9551 | likely_pathogenic | 0.9537 | pathogenic | -1.7 | Destabilizing | 0.895 | D | 0.75 | deleterious | None | None | None | None | N |
Y/M | 0.9895 | likely_pathogenic | 0.9917 | pathogenic | -1.65 | Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | N |
Y/N | 0.9929 | likely_pathogenic | 0.996 | pathogenic | -3.301 | Highly Destabilizing | 0.996 | D | 0.873 | deleterious | D | 0.529891844 | None | None | N |
Y/P | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -2.215 | Highly Destabilizing | 0.997 | D | 0.893 | deleterious | None | None | None | None | N |
Y/Q | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.002 | Highly Destabilizing | 0.997 | D | 0.812 | deleterious | None | None | None | None | N |
Y/R | 0.9985 | likely_pathogenic | 0.9991 | pathogenic | -2.231 | Highly Destabilizing | 0.992 | D | 0.868 | deleterious | None | None | None | None | N |
Y/S | 0.9978 | likely_pathogenic | 0.9987 | pathogenic | -3.671 | Highly Destabilizing | 0.989 | D | 0.881 | deleterious | D | 0.529891844 | None | None | N |
Y/T | 0.9988 | likely_pathogenic | 0.9992 | pathogenic | -3.317 | Highly Destabilizing | 0.992 | D | 0.883 | deleterious | None | None | None | None | N |
Y/V | 0.9658 | likely_pathogenic | 0.9707 | pathogenic | -2.215 | Highly Destabilizing | 0.895 | D | 0.784 | deleterious | None | None | None | None | N |
Y/W | 0.9518 | likely_pathogenic | 0.9364 | pathogenic | -0.507 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.