Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32182 | 96769;96770;96771 | chr2:178543429;178543428;178543427 | chr2:179408156;179408155;179408154 |
N2AB | 30541 | 91846;91847;91848 | chr2:178543429;178543428;178543427 | chr2:179408156;179408155;179408154 |
N2A | 29614 | 89065;89066;89067 | chr2:178543429;178543428;178543427 | chr2:179408156;179408155;179408154 |
N2B | 23117 | 69574;69575;69576 | chr2:178543429;178543428;178543427 | chr2:179408156;179408155;179408154 |
Novex-1 | 23242 | 69949;69950;69951 | chr2:178543429;178543428;178543427 | chr2:179408156;179408155;179408154 |
Novex-2 | 23309 | 70150;70151;70152 | chr2:178543429;178543428;178543427 | chr2:179408156;179408155;179408154 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1311963909 | -1.137 | 1.0 | N | 0.77 | 0.59 | 0.461759001683 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/G | rs1311963909 | -1.137 | 1.0 | N | 0.77 | 0.59 | 0.461759001683 | gnomAD-4.0.0 | 5.47381E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19581E-06 | 0 | 0 |
E/K | None | None | 0.998 | N | 0.552 | 0.378 | 0.366659145958 | gnomAD-4.0.0 | 2.05275E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52169E-05 | None | 0 | 0 | 8.99504E-07 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5616 | ambiguous | 0.5413 | ambiguous | -1.072 | Destabilizing | 0.997 | D | 0.684 | prob.neutral | N | 0.501413194 | None | None | I |
E/C | 0.9392 | likely_pathogenic | 0.936 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
E/D | 0.9108 | likely_pathogenic | 0.8887 | pathogenic | -1.614 | Destabilizing | 0.974 | D | 0.461 | neutral | N | 0.512021066 | None | None | I |
E/F | 0.9872 | likely_pathogenic | 0.9816 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
E/G | 0.7482 | likely_pathogenic | 0.73 | pathogenic | -1.421 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.500664761 | None | None | I |
E/H | 0.9567 | likely_pathogenic | 0.9417 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/I | 0.7822 | likely_pathogenic | 0.7428 | pathogenic | -0.11 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | I |
E/K | 0.6814 | likely_pathogenic | 0.6129 | pathogenic | -1.33 | Destabilizing | 0.998 | D | 0.552 | neutral | N | 0.468873569 | None | None | I |
E/L | 0.9196 | likely_pathogenic | 0.8937 | pathogenic | -0.11 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | I |
E/M | 0.8411 | likely_pathogenic | 0.8118 | pathogenic | 0.431 | Stabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | I |
E/N | 0.9274 | likely_pathogenic | 0.9103 | pathogenic | -1.541 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | I |
E/P | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -0.411 | Destabilizing | 0.994 | D | 0.834 | deleterious | None | None | None | None | I |
E/Q | 0.3385 | likely_benign | 0.295 | benign | -1.316 | Destabilizing | 0.999 | D | 0.633 | neutral | D | 0.52313526 | None | None | I |
E/R | 0.7969 | likely_pathogenic | 0.7453 | pathogenic | -1.3 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
E/S | 0.6975 | likely_pathogenic | 0.6727 | pathogenic | -2.057 | Highly Destabilizing | 0.997 | D | 0.615 | neutral | None | None | None | None | I |
E/T | 0.7735 | likely_pathogenic | 0.7347 | pathogenic | -1.736 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | I |
E/V | 0.499 | ambiguous | 0.4535 | ambiguous | -0.411 | Destabilizing | 0.998 | D | 0.834 | deleterious | N | 0.448034495 | None | None | I |
E/W | 0.9972 | likely_pathogenic | 0.9954 | pathogenic | -1.454 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
E/Y | 0.9808 | likely_pathogenic | 0.9747 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.