Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32185 | 96778;96779;96780 | chr2:178543420;178543419;178543418 | chr2:179408147;179408146;179408145 |
N2AB | 30544 | 91855;91856;91857 | chr2:178543420;178543419;178543418 | chr2:179408147;179408146;179408145 |
N2A | 29617 | 89074;89075;89076 | chr2:178543420;178543419;178543418 | chr2:179408147;179408146;179408145 |
N2B | 23120 | 69583;69584;69585 | chr2:178543420;178543419;178543418 | chr2:179408147;179408146;179408145 |
Novex-1 | 23245 | 69958;69959;69960 | chr2:178543420;178543419;178543418 | chr2:179408147;179408146;179408145 |
Novex-2 | 23312 | 70159;70160;70161 | chr2:178543420;178543419;178543418 | chr2:179408147;179408146;179408145 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1231801510 | 0.33 | 0.998 | N | 0.697 | 0.48 | 0.3571064206 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9543 | likely_pathogenic | 0.948 | pathogenic | -0.775 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
Y/C | 0.4929 | ambiguous | 0.4277 | ambiguous | -0.021 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.500029114 | None | None | I |
Y/D | 0.967 | likely_pathogenic | 0.9646 | pathogenic | 0.904 | Stabilizing | 0.999 | D | 0.757 | deleterious | N | 0.491204105 | None | None | I |
Y/E | 0.986 | likely_pathogenic | 0.9856 | pathogenic | 0.895 | Stabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | I |
Y/F | 0.1225 | likely_benign | 0.1085 | benign | -0.377 | Destabilizing | 0.98 | D | 0.506 | neutral | N | 0.500933191 | None | None | I |
Y/G | 0.9509 | likely_pathogenic | 0.9515 | pathogenic | -0.971 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
Y/H | 0.6741 | likely_pathogenic | 0.6323 | pathogenic | 0.143 | Stabilizing | 0.998 | D | 0.697 | prob.neutral | N | 0.512630265 | None | None | I |
Y/I | 0.8487 | likely_pathogenic | 0.8232 | pathogenic | -0.272 | Destabilizing | 0.987 | D | 0.725 | prob.delet. | None | None | None | None | I |
Y/K | 0.9852 | likely_pathogenic | 0.9854 | pathogenic | 0.112 | Stabilizing | 0.996 | D | 0.737 | prob.delet. | None | None | None | None | I |
Y/L | 0.7732 | likely_pathogenic | 0.7523 | pathogenic | -0.272 | Destabilizing | 0.954 | D | 0.706 | prob.neutral | None | None | None | None | I |
Y/M | 0.9144 | likely_pathogenic | 0.9053 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
Y/N | 0.8187 | likely_pathogenic | 0.8138 | pathogenic | -0.111 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.464959549 | None | None | I |
Y/P | 0.9922 | likely_pathogenic | 0.9918 | pathogenic | -0.421 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | I |
Y/Q | 0.9662 | likely_pathogenic | 0.966 | pathogenic | -0.048 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | I |
Y/R | 0.9432 | likely_pathogenic | 0.9431 | pathogenic | 0.37 | Stabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | I |
Y/S | 0.8701 | likely_pathogenic | 0.863 | pathogenic | -0.574 | Destabilizing | 0.999 | D | 0.744 | deleterious | N | 0.521884466 | None | None | I |
Y/T | 0.9556 | likely_pathogenic | 0.9594 | pathogenic | -0.488 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | I |
Y/V | 0.7997 | likely_pathogenic | 0.7952 | pathogenic | -0.421 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | I |
Y/W | 0.6017 | likely_pathogenic | 0.5732 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.