Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32189 | 96790;96791;96792 | chr2:178543408;178543407;178543406 | chr2:179408135;179408134;179408133 |
N2AB | 30548 | 91867;91868;91869 | chr2:178543408;178543407;178543406 | chr2:179408135;179408134;179408133 |
N2A | 29621 | 89086;89087;89088 | chr2:178543408;178543407;178543406 | chr2:179408135;179408134;179408133 |
N2B | 23124 | 69595;69596;69597 | chr2:178543408;178543407;178543406 | chr2:179408135;179408134;179408133 |
Novex-1 | 23249 | 69970;69971;69972 | chr2:178543408;178543407;178543406 | chr2:179408135;179408134;179408133 |
Novex-2 | 23316 | 70171;70172;70173 | chr2:178543408;178543407;178543406 | chr2:179408135;179408134;179408133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs1002475776 | None | 1.0 | N | 0.773 | 0.513 | 0.448891444097 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/V | rs1002475776 | None | 1.0 | N | 0.773 | 0.513 | 0.448891444097 | gnomAD-4.0.0 | 8.05583E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.10187E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4072 | ambiguous | 0.3673 | ambiguous | -0.624 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.515763784 | None | None | I |
E/C | 0.9455 | likely_pathogenic | 0.9472 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/D | 0.2631 | likely_benign | 0.2565 | benign | -0.638 | Destabilizing | 0.999 | D | 0.573 | neutral | N | 0.490329408 | None | None | I |
E/F | 0.9175 | likely_pathogenic | 0.9027 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/G | 0.6138 | likely_pathogenic | 0.5582 | ambiguous | -0.882 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.490292279 | None | None | I |
E/H | 0.8507 | likely_pathogenic | 0.8226 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
E/I | 0.4943 | ambiguous | 0.4623 | ambiguous | 0.046 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
E/K | 0.5153 | ambiguous | 0.4225 | ambiguous | -0.079 | Destabilizing | 0.999 | D | 0.674 | neutral | N | 0.494447149 | None | None | I |
E/L | 0.585 | likely_pathogenic | 0.5444 | ambiguous | 0.046 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
E/M | 0.6434 | likely_pathogenic | 0.6039 | pathogenic | 0.199 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/N | 0.5954 | likely_pathogenic | 0.5613 | ambiguous | -0.49 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/P | 0.8462 | likely_pathogenic | 0.8377 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
E/Q | 0.3304 | likely_benign | 0.2786 | benign | -0.427 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | N | 0.518324086 | None | None | I |
E/R | 0.7057 | likely_pathogenic | 0.6505 | pathogenic | 0.251 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/S | 0.5262 | ambiguous | 0.4773 | ambiguous | -0.684 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | I |
E/T | 0.5483 | ambiguous | 0.523 | ambiguous | -0.475 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
E/V | 0.3159 | likely_benign | 0.2969 | benign | -0.157 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.516283859 | None | None | I |
E/W | 0.9843 | likely_pathogenic | 0.9821 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/Y | 0.8761 | likely_pathogenic | 0.8545 | pathogenic | -0.036 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.