Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32190 | 96793;96794;96795 | chr2:178543405;178543404;178543403 | chr2:179408132;179408131;179408130 |
N2AB | 30549 | 91870;91871;91872 | chr2:178543405;178543404;178543403 | chr2:179408132;179408131;179408130 |
N2A | 29622 | 89089;89090;89091 | chr2:178543405;178543404;178543403 | chr2:179408132;179408131;179408130 |
N2B | 23125 | 69598;69599;69600 | chr2:178543405;178543404;178543403 | chr2:179408132;179408131;179408130 |
Novex-1 | 23250 | 69973;69974;69975 | chr2:178543405;178543404;178543403 | chr2:179408132;179408131;179408130 |
Novex-2 | 23317 | 70174;70175;70176 | chr2:178543405;178543404;178543403 | chr2:179408132;179408131;179408130 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1314931381 | -1.696 | 0.028 | N | 0.417 | 0.253 | 0.322230723748 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
P/A | rs1314931381 | -1.696 | 0.028 | N | 0.417 | 0.253 | 0.322230723748 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88239E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1321 | likely_benign | 0.1269 | benign | -1.554 | Destabilizing | 0.028 | N | 0.417 | neutral | N | 0.476088818 | None | None | N |
P/C | 0.8339 | likely_pathogenic | 0.8123 | pathogenic | -0.83 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
P/D | 0.9597 | likely_pathogenic | 0.9564 | pathogenic | -1.566 | Destabilizing | 0.955 | D | 0.667 | neutral | None | None | None | None | N |
P/E | 0.9098 | likely_pathogenic | 0.899 | pathogenic | -1.605 | Destabilizing | 0.943 | D | 0.674 | neutral | None | None | None | None | N |
P/F | 0.8726 | likely_pathogenic | 0.8349 | pathogenic | -1.288 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
P/G | 0.427 | ambiguous | 0.5092 | ambiguous | -1.826 | Destabilizing | 0.087 | N | 0.469 | neutral | None | None | None | None | N |
P/H | 0.7681 | likely_pathogenic | 0.725 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.519440579 | None | None | N |
P/I | 0.861 | likely_pathogenic | 0.8216 | pathogenic | -0.909 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
P/K | 0.9356 | likely_pathogenic | 0.9272 | pathogenic | -1.366 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
P/L | 0.6666 | likely_pathogenic | 0.5883 | pathogenic | -0.909 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | N | 0.499054918 | None | None | N |
P/M | 0.8194 | likely_pathogenic | 0.7883 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
P/N | 0.8808 | likely_pathogenic | 0.8715 | pathogenic | -1.032 | Destabilizing | 0.985 | D | 0.708 | prob.delet. | None | None | None | None | N |
P/Q | 0.7451 | likely_pathogenic | 0.7327 | pathogenic | -1.285 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
P/R | 0.8665 | likely_pathogenic | 0.8357 | pathogenic | -0.699 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.500322366 | None | None | N |
P/S | 0.3794 | ambiguous | 0.3816 | ambiguous | -1.454 | Destabilizing | 0.941 | D | 0.59 | neutral | N | 0.494953542 | None | None | N |
P/T | 0.5272 | ambiguous | 0.4928 | ambiguous | -1.404 | Destabilizing | 0.98 | D | 0.685 | prob.neutral | N | 0.500575855 | None | None | N |
P/V | 0.7218 | likely_pathogenic | 0.6668 | pathogenic | -1.091 | Destabilizing | 0.979 | D | 0.673 | neutral | None | None | None | None | N |
P/W | 0.9553 | likely_pathogenic | 0.9379 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
P/Y | 0.8694 | likely_pathogenic | 0.8382 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.