Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32192 | 96799;96800;96801 | chr2:178543399;178543398;178543397 | chr2:179408126;179408125;179408124 |
N2AB | 30551 | 91876;91877;91878 | chr2:178543399;178543398;178543397 | chr2:179408126;179408125;179408124 |
N2A | 29624 | 89095;89096;89097 | chr2:178543399;178543398;178543397 | chr2:179408126;179408125;179408124 |
N2B | 23127 | 69604;69605;69606 | chr2:178543399;178543398;178543397 | chr2:179408126;179408125;179408124 |
Novex-1 | 23252 | 69979;69980;69981 | chr2:178543399;178543398;178543397 | chr2:179408126;179408125;179408124 |
Novex-2 | 23319 | 70180;70181;70182 | chr2:178543399;178543398;178543397 | chr2:179408126;179408125;179408124 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.99 | N | 0.79 | 0.455 | 0.402614778071 | gnomAD-4.0.0 | 1.5912E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
E/K | rs1286172719 | None | 0.995 | N | 0.799 | 0.354 | 0.432604763906 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1286172719 | None | 0.995 | N | 0.799 | 0.354 | 0.432604763906 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | N | None | 0 | 6.5505E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5081 | ambiguous | 0.4815 | ambiguous | -0.627 | Destabilizing | 0.99 | D | 0.79 | deleterious | N | 0.473162302 | None | None | N |
E/C | 0.9535 | likely_pathogenic | 0.9513 | pathogenic | -0.244 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
E/D | 0.4781 | ambiguous | 0.4453 | ambiguous | -1.061 | Destabilizing | 0.928 | D | 0.741 | deleterious | N | 0.470617862 | None | None | N |
E/F | 0.9431 | likely_pathogenic | 0.9381 | pathogenic | 0.305 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/G | 0.6749 | likely_pathogenic | 0.6408 | pathogenic | -1.076 | Destabilizing | 0.999 | D | 0.739 | deleterious | N | 0.482520826 | None | None | N |
E/H | 0.8737 | likely_pathogenic | 0.8568 | pathogenic | 0.111 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/I | 0.7116 | likely_pathogenic | 0.6888 | pathogenic | 0.626 | Stabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
E/K | 0.6352 | likely_pathogenic | 0.5823 | pathogenic | -0.326 | Destabilizing | 0.995 | D | 0.799 | deleterious | N | 0.482494373 | None | None | N |
E/L | 0.7794 | likely_pathogenic | 0.7647 | pathogenic | 0.626 | Stabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
E/M | 0.7557 | likely_pathogenic | 0.7379 | pathogenic | 1.105 | Stabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
E/N | 0.7965 | likely_pathogenic | 0.7597 | pathogenic | -1.044 | Destabilizing | 0.995 | D | 0.773 | deleterious | None | None | None | None | N |
E/P | 0.9324 | likely_pathogenic | 0.9335 | pathogenic | 0.23 | Stabilizing | 0.984 | D | 0.77 | deleterious | None | None | None | None | N |
E/Q | 0.3576 | ambiguous | 0.3317 | benign | -0.821 | Destabilizing | 0.998 | D | 0.765 | deleterious | N | 0.474442977 | None | None | N |
E/R | 0.7463 | likely_pathogenic | 0.7359 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
E/S | 0.6035 | likely_pathogenic | 0.5697 | pathogenic | -1.455 | Destabilizing | 0.992 | D | 0.791 | deleterious | None | None | None | None | N |
E/T | 0.6038 | likely_pathogenic | 0.5948 | pathogenic | -1.052 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
E/V | 0.5034 | ambiguous | 0.4835 | ambiguous | 0.23 | Stabilizing | 0.995 | D | 0.777 | deleterious | N | 0.470657541 | None | None | N |
E/W | 0.9878 | likely_pathogenic | 0.9868 | pathogenic | 0.622 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/Y | 0.9228 | likely_pathogenic | 0.918 | pathogenic | 0.63 | Stabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.