Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32196 | 96811;96812;96813 | chr2:178543387;178543386;178543385 | chr2:179408114;179408113;179408112 |
N2AB | 30555 | 91888;91889;91890 | chr2:178543387;178543386;178543385 | chr2:179408114;179408113;179408112 |
N2A | 29628 | 89107;89108;89109 | chr2:178543387;178543386;178543385 | chr2:179408114;179408113;179408112 |
N2B | 23131 | 69616;69617;69618 | chr2:178543387;178543386;178543385 | chr2:179408114;179408113;179408112 |
Novex-1 | 23256 | 69991;69992;69993 | chr2:178543387;178543386;178543385 | chr2:179408114;179408113;179408112 |
Novex-2 | 23323 | 70192;70193;70194 | chr2:178543387;178543386;178543385 | chr2:179408114;179408113;179408112 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.06 | N | 0.427 | 0.19 | 0.223847106136 | gnomAD-4.0.0 | 3.42095E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49724E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5623 | ambiguous | 0.5336 | ambiguous | -0.656 | Destabilizing | 1.0 | D | 0.724 | deleterious | None | None | None | None | N |
A/D | 0.8233 | likely_pathogenic | 0.7936 | pathogenic | -0.927 | Destabilizing | 0.99 | D | 0.718 | prob.delet. | None | None | None | None | N |
A/E | 0.6945 | likely_pathogenic | 0.676 | pathogenic | -0.979 | Destabilizing | 0.986 | D | 0.707 | prob.delet. | N | 0.486875692 | None | None | N |
A/F | 0.7028 | likely_pathogenic | 0.6552 | pathogenic | -0.996 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
A/G | 0.2488 | likely_benign | 0.2232 | benign | -1.06 | Destabilizing | 0.953 | D | 0.565 | neutral | N | 0.487945251 | None | None | N |
A/H | 0.818 | likely_pathogenic | 0.7969 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
A/I | 0.4719 | ambiguous | 0.4174 | ambiguous | -0.359 | Destabilizing | 0.995 | D | 0.757 | deleterious | None | None | None | None | N |
A/K | 0.8481 | likely_pathogenic | 0.8374 | pathogenic | -1.05 | Destabilizing | 0.99 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/L | 0.4453 | ambiguous | 0.4103 | ambiguous | -0.359 | Destabilizing | 0.982 | D | 0.663 | prob.neutral | None | None | None | None | N |
A/M | 0.4231 | ambiguous | 0.3918 | ambiguous | -0.198 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
A/N | 0.609 | likely_pathogenic | 0.5768 | pathogenic | -0.719 | Destabilizing | 0.99 | D | 0.845 | deleterious | None | None | None | None | N |
A/P | 0.1577 | likely_benign | 0.155 | benign | -0.474 | Destabilizing | 0.06 | N | 0.427 | neutral | N | 0.379932352 | None | None | N |
A/Q | 0.6955 | likely_pathogenic | 0.6793 | pathogenic | -0.902 | Destabilizing | 0.995 | D | 0.739 | deleterious | None | None | None | None | N |
A/R | 0.7854 | likely_pathogenic | 0.7731 | pathogenic | -0.666 | Destabilizing | 0.995 | D | 0.759 | deleterious | None | None | None | None | N |
A/S | 0.1479 | likely_benign | 0.1337 | benign | -1.061 | Destabilizing | 0.647 | D | 0.378 | neutral | N | 0.42789687 | None | None | N |
A/T | 0.1921 | likely_benign | 0.1741 | benign | -1.023 | Destabilizing | 0.91 | D | 0.691 | prob.delet. | N | 0.488963971 | None | None | N |
A/V | 0.2371 | likely_benign | 0.2047 | benign | -0.474 | Destabilizing | 0.976 | D | 0.698 | prob.delet. | N | 0.476936037 | None | None | N |
A/W | 0.9342 | likely_pathogenic | 0.9192 | pathogenic | -1.317 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
A/Y | 0.7996 | likely_pathogenic | 0.7704 | pathogenic | -0.92 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.