Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32200 | 96823;96824;96825 | chr2:178543375;178543374;178543373 | chr2:179408102;179408101;179408100 |
N2AB | 30559 | 91900;91901;91902 | chr2:178543375;178543374;178543373 | chr2:179408102;179408101;179408100 |
N2A | 29632 | 89119;89120;89121 | chr2:178543375;178543374;178543373 | chr2:179408102;179408101;179408100 |
N2B | 23135 | 69628;69629;69630 | chr2:178543375;178543374;178543373 | chr2:179408102;179408101;179408100 |
Novex-1 | 23260 | 70003;70004;70005 | chr2:178543375;178543374;178543373 | chr2:179408102;179408101;179408100 |
Novex-2 | 23327 | 70204;70205;70206 | chr2:178543375;178543374;178543373 | chr2:179408102;179408101;179408100 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.999 | N | 0.565 | 0.273 | 0.490631539035 | gnomAD-4.0.0 | 4.10515E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.3967E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0907 | likely_benign | 0.0874 | benign | -0.691 | Destabilizing | 0.57 | D | 0.367 | neutral | N | 0.463353451 | None | None | N |
S/C | 0.1183 | likely_benign | 0.1127 | benign | -0.602 | Destabilizing | 0.636 | D | 0.281 | neutral | None | None | None | None | N |
S/D | 0.9058 | likely_pathogenic | 0.915 | pathogenic | -0.04 | Destabilizing | 0.997 | D | 0.491 | neutral | None | None | None | None | N |
S/E | 0.9021 | likely_pathogenic | 0.9149 | pathogenic | -0.097 | Destabilizing | 0.998 | D | 0.48 | neutral | None | None | None | None | N |
S/F | 0.7026 | likely_pathogenic | 0.6782 | pathogenic | -1.04 | Destabilizing | 1.0 | D | 0.705 | prob.delet. | None | None | None | None | N |
S/G | 0.1561 | likely_benign | 0.1739 | benign | -0.856 | Destabilizing | 0.995 | D | 0.355 | neutral | None | None | None | None | N |
S/H | 0.7762 | likely_pathogenic | 0.7902 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.475 | neutral | None | None | None | None | N |
S/I | 0.7173 | likely_pathogenic | 0.6864 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
S/K | 0.9364 | likely_pathogenic | 0.9443 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.491 | neutral | None | None | None | None | N |
S/L | 0.336 | likely_benign | 0.3154 | benign | -0.368 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.471954291 | None | None | N |
S/M | 0.466 | ambiguous | 0.4655 | ambiguous | -0.104 | Destabilizing | 1.0 | D | 0.477 | neutral | None | None | None | None | N |
S/N | 0.5512 | ambiguous | 0.5862 | pathogenic | -0.501 | Destabilizing | 0.974 | D | 0.543 | neutral | None | None | None | None | N |
S/P | 0.9359 | likely_pathogenic | 0.9313 | pathogenic | -0.446 | Destabilizing | 0.999 | D | 0.554 | neutral | N | 0.48945983 | None | None | N |
S/Q | 0.7879 | likely_pathogenic | 0.8154 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.456 | neutral | None | None | None | None | N |
S/R | 0.8686 | likely_pathogenic | 0.8833 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.559 | neutral | None | None | None | None | N |
S/T | 0.1611 | likely_benign | 0.1562 | benign | -0.623 | Destabilizing | 0.599 | D | 0.423 | neutral | N | 0.519169448 | None | None | N |
S/V | 0.5297 | ambiguous | 0.5033 | ambiguous | -0.446 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
S/W | 0.7509 | likely_pathogenic | 0.7364 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
S/Y | 0.6049 | likely_pathogenic | 0.5945 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.707 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.