Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32208 | 96847;96848;96849 | chr2:178543351;178543350;178543349 | chr2:179408078;179408077;179408076 |
N2AB | 30567 | 91924;91925;91926 | chr2:178543351;178543350;178543349 | chr2:179408078;179408077;179408076 |
N2A | 29640 | 89143;89144;89145 | chr2:178543351;178543350;178543349 | chr2:179408078;179408077;179408076 |
N2B | 23143 | 69652;69653;69654 | chr2:178543351;178543350;178543349 | chr2:179408078;179408077;179408076 |
Novex-1 | 23268 | 70027;70028;70029 | chr2:178543351;178543350;178543349 | chr2:179408078;179408077;179408076 |
Novex-2 | 23335 | 70228;70229;70230 | chr2:178543351;178543350;178543349 | chr2:179408078;179408077;179408076 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.887 | N | 0.532 | 0.139 | 0.245660935333 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3179 | likely_benign | 0.3091 | benign | -0.011 | Destabilizing | 0.983 | D | 0.581 | neutral | None | None | None | None | I |
K/C | 0.675 | likely_pathogenic | 0.6611 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
K/D | 0.5022 | ambiguous | 0.4846 | ambiguous | -0.027 | Destabilizing | 0.035 | N | 0.279 | neutral | None | None | None | None | I |
K/E | 0.2433 | likely_benign | 0.2439 | benign | -0.02 | Destabilizing | 0.565 | D | 0.547 | neutral | N | 0.48074992 | None | None | I |
K/F | 0.7719 | likely_pathogenic | 0.7459 | pathogenic | -0.157 | Destabilizing | 0.996 | D | 0.708 | prob.delet. | None | None | None | None | I |
K/G | 0.3658 | ambiguous | 0.3632 | ambiguous | -0.228 | Destabilizing | 0.965 | D | 0.581 | neutral | None | None | None | None | I |
K/H | 0.2723 | likely_benign | 0.2644 | benign | -0.511 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
K/I | 0.4643 | ambiguous | 0.4548 | ambiguous | 0.485 | Stabilizing | 0.946 | D | 0.704 | prob.neutral | None | None | None | None | I |
K/L | 0.4115 | ambiguous | 0.3953 | ambiguous | 0.485 | Stabilizing | 0.853 | D | 0.574 | neutral | None | None | None | None | I |
K/M | 0.2945 | likely_benign | 0.2877 | benign | 0.29 | Stabilizing | 0.995 | D | 0.625 | neutral | N | 0.506917801 | None | None | I |
K/N | 0.3746 | ambiguous | 0.3657 | ambiguous | 0.202 | Stabilizing | 0.954 | D | 0.533 | neutral | N | 0.389354337 | None | None | I |
K/P | 0.7788 | likely_pathogenic | 0.7766 | pathogenic | 0.349 | Stabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | I |
K/Q | 0.1542 | likely_benign | 0.1511 | benign | 0.007 | Stabilizing | 0.947 | D | 0.559 | neutral | N | 0.473207872 | None | None | I |
K/R | 0.0793 | likely_benign | 0.0782 | benign | -0.084 | Destabilizing | 0.887 | D | 0.532 | neutral | N | 0.47338123 | None | None | I |
K/S | 0.3681 | ambiguous | 0.3454 | ambiguous | -0.279 | Destabilizing | 0.965 | D | 0.539 | neutral | None | None | None | None | I |
K/T | 0.1898 | likely_benign | 0.188 | benign | -0.123 | Destabilizing | 0.927 | D | 0.58 | neutral | N | 0.466628616 | None | None | I |
K/V | 0.3534 | ambiguous | 0.3455 | ambiguous | 0.349 | Stabilizing | 0.959 | D | 0.576 | neutral | None | None | None | None | I |
K/W | 0.7911 | likely_pathogenic | 0.769 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
K/Y | 0.6311 | likely_pathogenic | 0.6106 | pathogenic | 0.185 | Stabilizing | 0.965 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.