Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32216 | 96871;96872;96873 | chr2:178543327;178543326;178543325 | chr2:179408054;179408053;179408052 |
N2AB | 30575 | 91948;91949;91950 | chr2:178543327;178543326;178543325 | chr2:179408054;179408053;179408052 |
N2A | 29648 | 89167;89168;89169 | chr2:178543327;178543326;178543325 | chr2:179408054;179408053;179408052 |
N2B | 23151 | 69676;69677;69678 | chr2:178543327;178543326;178543325 | chr2:179408054;179408053;179408052 |
Novex-1 | 23276 | 70051;70052;70053 | chr2:178543327;178543326;178543325 | chr2:179408054;179408053;179408052 |
Novex-2 | 23343 | 70252;70253;70254 | chr2:178543327;178543326;178543325 | chr2:179408054;179408053;179408052 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs771585130 | -0.453 | 0.978 | N | 0.688 | 0.293 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/Q | rs771585130 | -0.453 | 0.978 | N | 0.688 | 0.293 | None | gnomAD-4.0.0 | 4.77333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71611E-06 | 0 | 3.02352E-05 |
K/T | rs1695519342 | None | 0.978 | N | 0.673 | 0.295 | 0.321393169273 | gnomAD-4.0.0 | 2.05254E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47794E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.437 | ambiguous | 0.45 | ambiguous | -0.19 | Destabilizing | 0.944 | D | 0.556 | neutral | None | None | None | None | N |
K/C | 0.8268 | likely_pathogenic | 0.8354 | pathogenic | -0.233 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
K/D | 0.7919 | likely_pathogenic | 0.7964 | pathogenic | -0.143 | Destabilizing | 0.983 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/E | 0.4076 | ambiguous | 0.4236 | ambiguous | -0.141 | Destabilizing | 0.928 | D | 0.484 | neutral | N | 0.499295608 | None | None | N |
K/F | 0.9508 | likely_pathogenic | 0.9503 | pathogenic | -0.471 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
K/G | 0.5117 | ambiguous | 0.5244 | ambiguous | -0.41 | Destabilizing | 0.983 | D | 0.659 | neutral | None | None | None | None | N |
K/H | 0.5152 | ambiguous | 0.4959 | ambiguous | -0.875 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/I | 0.8043 | likely_pathogenic | 0.8014 | pathogenic | 0.318 | Stabilizing | 0.989 | D | 0.776 | deleterious | N | 0.488093914 | None | None | N |
K/L | 0.6824 | likely_pathogenic | 0.6751 | pathogenic | 0.318 | Stabilizing | 0.983 | D | 0.659 | neutral | None | None | None | None | N |
K/M | 0.5737 | likely_pathogenic | 0.5865 | pathogenic | 0.431 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/N | 0.6615 | likely_pathogenic | 0.6778 | pathogenic | 0.117 | Stabilizing | 0.978 | D | 0.689 | prob.neutral | N | 0.515939929 | None | None | N |
K/P | 0.7283 | likely_pathogenic | 0.7373 | pathogenic | 0.178 | Stabilizing | 0.992 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Q | 0.2297 | likely_benign | 0.2336 | benign | -0.184 | Destabilizing | 0.978 | D | 0.688 | prob.neutral | N | 0.4721028 | None | None | N |
K/R | 0.0807 | likely_benign | 0.0784 | benign | -0.086 | Destabilizing | 0.085 | N | 0.28 | neutral | N | 0.454411467 | None | None | N |
K/S | 0.5546 | ambiguous | 0.5593 | ambiguous | -0.429 | Destabilizing | 0.944 | D | 0.595 | neutral | None | None | None | None | N |
K/T | 0.4372 | ambiguous | 0.4341 | ambiguous | -0.275 | Destabilizing | 0.978 | D | 0.673 | neutral | N | 0.467112369 | None | None | N |
K/V | 0.6799 | likely_pathogenic | 0.6724 | pathogenic | 0.178 | Stabilizing | 0.983 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/W | 0.9335 | likely_pathogenic | 0.9309 | pathogenic | -0.399 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
K/Y | 0.8617 | likely_pathogenic | 0.8633 | pathogenic | -0.029 | Destabilizing | 0.997 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.