Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32220 | 96883;96884;96885 | chr2:178543315;178543314;178543313 | chr2:179408042;179408041;179408040 |
N2AB | 30579 | 91960;91961;91962 | chr2:178543315;178543314;178543313 | chr2:179408042;179408041;179408040 |
N2A | 29652 | 89179;89180;89181 | chr2:178543315;178543314;178543313 | chr2:179408042;179408041;179408040 |
N2B | 23155 | 69688;69689;69690 | chr2:178543315;178543314;178543313 | chr2:179408042;179408041;179408040 |
Novex-1 | 23280 | 70063;70064;70065 | chr2:178543315;178543314;178543313 | chr2:179408042;179408041;179408040 |
Novex-2 | 23347 | 70264;70265;70266 | chr2:178543315;178543314;178543313 | chr2:179408042;179408041;179408040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs727505204 | 0.116 | 0.031 | N | 0.379 | 0.173 | 0.303453137403 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
T/I | rs727505204 | 0.116 | 0.031 | N | 0.379 | 0.173 | 0.303453137403 | gnomAD-4.0.0 | 3.42088E-06 | None | None | None | None | N | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59778E-06 | 0 | 0 |
T/S | None | None | 0.003 | N | 0.298 | 0.103 | 0.18995819373 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1169 | likely_benign | 0.1016 | benign | -1.013 | Destabilizing | 0.174 | N | 0.489 | neutral | N | 0.47085226 | None | None | N |
T/C | 0.4127 | ambiguous | 0.3416 | ambiguous | -1.004 | Destabilizing | 0.973 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/D | 0.5974 | likely_pathogenic | 0.5577 | ambiguous | -1.552 | Destabilizing | 0.826 | D | 0.621 | neutral | None | None | None | None | N |
T/E | 0.5303 | ambiguous | 0.4784 | ambiguous | -1.436 | Destabilizing | 0.704 | D | 0.627 | neutral | None | None | None | None | N |
T/F | 0.3467 | ambiguous | 0.2741 | benign | -0.751 | Destabilizing | 0.906 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/G | 0.3067 | likely_benign | 0.248 | benign | -1.358 | Destabilizing | 0.404 | N | 0.615 | neutral | None | None | None | None | N |
T/H | 0.2707 | likely_benign | 0.2488 | benign | -1.564 | Destabilizing | 0.973 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/I | 0.2056 | likely_benign | 0.1753 | benign | -0.144 | Destabilizing | 0.031 | N | 0.379 | neutral | N | 0.470447413 | None | None | N |
T/K | 0.2449 | likely_benign | 0.2383 | benign | -0.937 | Destabilizing | 0.704 | D | 0.626 | neutral | None | None | None | None | N |
T/L | 0.1441 | likely_benign | 0.1173 | benign | -0.144 | Destabilizing | 0.404 | N | 0.539 | neutral | None | None | None | None | N |
T/M | 0.1184 | likely_benign | 0.1058 | benign | -0.114 | Destabilizing | 0.973 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/N | 0.1898 | likely_benign | 0.1726 | benign | -1.351 | Destabilizing | 0.642 | D | 0.577 | neutral | N | 0.46913074 | None | None | N |
T/P | 0.7248 | likely_pathogenic | 0.6202 | pathogenic | -0.402 | Destabilizing | 0.782 | D | 0.675 | neutral | N | 0.500263595 | None | None | N |
T/Q | 0.2768 | likely_benign | 0.2556 | benign | -1.34 | Destabilizing | 0.826 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/R | 0.2007 | likely_benign | 0.195 | benign | -0.878 | Destabilizing | 0.826 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/S | 0.1113 | likely_benign | 0.094 | benign | -1.502 | Destabilizing | 0.003 | N | 0.298 | neutral | N | 0.478461763 | None | None | N |
T/V | 0.1614 | likely_benign | 0.1407 | benign | -0.402 | Destabilizing | 0.404 | N | 0.518 | neutral | None | None | None | None | N |
T/W | 0.6667 | likely_pathogenic | 0.5674 | pathogenic | -0.841 | Destabilizing | 0.991 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/Y | 0.3628 | ambiguous | 0.2926 | benign | -0.517 | Destabilizing | 0.906 | D | 0.744 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.