Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32221 | 96886;96887;96888 | chr2:178543312;178543311;178543310 | chr2:179408039;179408038;179408037 |
N2AB | 30580 | 91963;91964;91965 | chr2:178543312;178543311;178543310 | chr2:179408039;179408038;179408037 |
N2A | 29653 | 89182;89183;89184 | chr2:178543312;178543311;178543310 | chr2:179408039;179408038;179408037 |
N2B | 23156 | 69691;69692;69693 | chr2:178543312;178543311;178543310 | chr2:179408039;179408038;179408037 |
Novex-1 | 23281 | 70066;70067;70068 | chr2:178543312;178543311;178543310 | chr2:179408039;179408038;179408037 |
Novex-2 | 23348 | 70267;70268;70269 | chr2:178543312;178543311;178543310 | chr2:179408039;179408038;179408037 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1695511296 | None | 0.05 | N | 0.616 | 0.181 | 0.448597761117 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8436 | likely_pathogenic | 0.8451 | pathogenic | -2.652 | Highly Destabilizing | 0.962 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/C | 0.8731 | likely_pathogenic | 0.8777 | pathogenic | -1.714 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -3.305 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
L/E | 0.9933 | likely_pathogenic | 0.9948 | pathogenic | -2.962 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/F | 0.4902 | ambiguous | 0.4758 | ambiguous | -1.561 | Destabilizing | 0.964 | D | 0.707 | prob.neutral | D | 0.52312538 | None | None | N |
L/G | 0.982 | likely_pathogenic | 0.9843 | pathogenic | -3.278 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
L/H | 0.9842 | likely_pathogenic | 0.9861 | pathogenic | -3.079 | Highly Destabilizing | 0.998 | D | 0.911 | deleterious | D | 0.551397852 | None | None | N |
L/I | 0.1404 | likely_benign | 0.1362 | benign | -0.755 | Destabilizing | 0.004 | N | 0.329 | neutral | N | 0.51752437 | None | None | N |
L/K | 0.9882 | likely_pathogenic | 0.991 | pathogenic | -1.93 | Destabilizing | 0.994 | D | 0.9 | deleterious | None | None | None | None | N |
L/M | 0.2411 | likely_benign | 0.2483 | benign | -0.974 | Destabilizing | 0.914 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/N | 0.9949 | likely_pathogenic | 0.9962 | pathogenic | -2.714 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
L/P | 0.9896 | likely_pathogenic | 0.9912 | pathogenic | -1.381 | Destabilizing | 1.0 | D | 0.935 | deleterious | D | 0.551397852 | None | None | N |
L/Q | 0.9765 | likely_pathogenic | 0.9808 | pathogenic | -2.288 | Highly Destabilizing | 1.0 | D | 0.93 | deleterious | None | None | None | None | N |
L/R | 0.9759 | likely_pathogenic | 0.9805 | pathogenic | -2.157 | Highly Destabilizing | 0.999 | D | 0.921 | deleterious | D | 0.551397852 | None | None | N |
L/S | 0.9827 | likely_pathogenic | 0.9838 | pathogenic | -3.22 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/T | 0.8962 | likely_pathogenic | 0.9071 | pathogenic | -2.702 | Highly Destabilizing | 0.964 | D | 0.759 | deleterious | None | None | None | None | N |
L/V | 0.1379 | likely_benign | 0.1327 | benign | -1.381 | Destabilizing | 0.05 | N | 0.616 | neutral | N | 0.473676644 | None | None | N |
L/W | 0.9362 | likely_pathogenic | 0.9424 | pathogenic | -1.925 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/Y | 0.9512 | likely_pathogenic | 0.9545 | pathogenic | -1.74 | Destabilizing | 0.894 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.