Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32234 | 96925;96926;96927 | chr2:178543273;178543272;178543271 | chr2:179408000;179407999;179407998 |
N2AB | 30593 | 92002;92003;92004 | chr2:178543273;178543272;178543271 | chr2:179408000;179407999;179407998 |
N2A | 29666 | 89221;89222;89223 | chr2:178543273;178543272;178543271 | chr2:179408000;179407999;179407998 |
N2B | 23169 | 69730;69731;69732 | chr2:178543273;178543272;178543271 | chr2:179408000;179407999;179407998 |
Novex-1 | 23294 | 70105;70106;70107 | chr2:178543273;178543272;178543271 | chr2:179408000;179407999;179407998 |
Novex-2 | 23361 | 70306;70307;70308 | chr2:178543273;178543272;178543271 | chr2:179408000;179407999;179407998 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | N | 0.827 | 0.666 | 0.817826572935 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8252 | likely_pathogenic | 0.8337 | pathogenic | -2.388 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | I |
L/C | 0.8171 | likely_pathogenic | 0.8046 | pathogenic | -1.796 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
L/D | 0.9897 | likely_pathogenic | 0.9897 | pathogenic | -2.548 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
L/E | 0.9335 | likely_pathogenic | 0.9372 | pathogenic | -2.427 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
L/F | 0.6633 | likely_pathogenic | 0.6246 | pathogenic | -1.564 | Destabilizing | 1.0 | D | 0.794 | deleterious | N | 0.492511233 | None | None | I |
L/G | 0.9491 | likely_pathogenic | 0.954 | pathogenic | -2.842 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
L/H | 0.9006 | likely_pathogenic | 0.8919 | pathogenic | -2.165 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | N | 0.495806597 | None | None | I |
L/I | 0.1065 | likely_benign | 0.0939 | benign | -1.127 | Destabilizing | 0.999 | D | 0.672 | neutral | N | 0.356916632 | None | None | I |
L/K | 0.9001 | likely_pathogenic | 0.9136 | pathogenic | -1.807 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
L/M | 0.274 | likely_benign | 0.2402 | benign | -1.028 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
L/N | 0.9084 | likely_pathogenic | 0.9025 | pathogenic | -1.904 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
L/P | 0.6256 | likely_pathogenic | 0.7199 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.869 | deleterious | N | 0.518193587 | None | None | I |
L/Q | 0.8113 | likely_pathogenic | 0.8101 | pathogenic | -1.954 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
L/R | 0.8686 | likely_pathogenic | 0.8882 | pathogenic | -1.297 | Destabilizing | 1.0 | D | 0.891 | deleterious | N | 0.495806597 | None | None | I |
L/S | 0.9359 | likely_pathogenic | 0.9309 | pathogenic | -2.575 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
L/T | 0.7907 | likely_pathogenic | 0.7837 | pathogenic | -2.325 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
L/V | 0.138 | likely_benign | 0.1249 | benign | -1.523 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.420336179 | None | None | I |
L/W | 0.8769 | likely_pathogenic | 0.8679 | pathogenic | -1.832 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
L/Y | 0.9023 | likely_pathogenic | 0.8941 | pathogenic | -1.585 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.