Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32237 | 96934;96935;96936 | chr2:178543264;178543263;178543262 | chr2:179407991;179407990;179407989 |
N2AB | 30596 | 92011;92012;92013 | chr2:178543264;178543263;178543262 | chr2:179407991;179407990;179407989 |
N2A | 29669 | 89230;89231;89232 | chr2:178543264;178543263;178543262 | chr2:179407991;179407990;179407989 |
N2B | 23172 | 69739;69740;69741 | chr2:178543264;178543263;178543262 | chr2:179407991;179407990;179407989 |
Novex-1 | 23297 | 70114;70115;70116 | chr2:178543264;178543263;178543262 | chr2:179407991;179407990;179407989 |
Novex-2 | 23364 | 70315;70316;70317 | chr2:178543264;178543263;178543262 | chr2:179407991;179407990;179407989 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 1.0 | D | 0.71 | 0.865 | 0.740777020696 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85814E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9844 | likely_pathogenic | 0.9885 | pathogenic | -3.609 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
Y/C | 0.7809 | likely_pathogenic | 0.8151 | pathogenic | -1.786 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.64794073 | None | None | N |
Y/D | 0.9874 | likely_pathogenic | 0.9916 | pathogenic | -3.746 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.648142535 | None | None | N |
Y/E | 0.9962 | likely_pathogenic | 0.9974 | pathogenic | -3.538 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Y/F | 0.1431 | likely_benign | 0.1541 | benign | -1.695 | Destabilizing | 0.184 | N | 0.328 | neutral | D | 0.547000904 | None | None | N |
Y/G | 0.9722 | likely_pathogenic | 0.979 | pathogenic | -3.978 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/H | 0.9328 | likely_pathogenic | 0.9509 | pathogenic | -2.872 | Highly Destabilizing | 1.0 | D | 0.71 | prob.delet. | D | 0.631517761 | None | None | N |
Y/I | 0.9064 | likely_pathogenic | 0.9249 | pathogenic | -2.337 | Highly Destabilizing | 0.991 | D | 0.728 | prob.delet. | None | None | None | None | N |
Y/K | 0.9955 | likely_pathogenic | 0.997 | pathogenic | -2.64 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/L | 0.8452 | likely_pathogenic | 0.8622 | pathogenic | -2.337 | Highly Destabilizing | 0.939 | D | 0.727 | prob.delet. | None | None | None | None | N |
Y/M | 0.9323 | likely_pathogenic | 0.9445 | pathogenic | -1.956 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Y/N | 0.9431 | likely_pathogenic | 0.9538 | pathogenic | -3.392 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.64794073 | None | None | N |
Y/P | 0.9972 | likely_pathogenic | 0.9983 | pathogenic | -2.782 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/Q | 0.9938 | likely_pathogenic | 0.9959 | pathogenic | -3.114 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Y/R | 0.9867 | likely_pathogenic | 0.9914 | pathogenic | -2.476 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Y/S | 0.96 | likely_pathogenic | 0.9685 | pathogenic | -3.628 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.64794073 | None | None | N |
Y/T | 0.9802 | likely_pathogenic | 0.9858 | pathogenic | -3.31 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/V | 0.8685 | likely_pathogenic | 0.8884 | pathogenic | -2.782 | Highly Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
Y/W | 0.6619 | likely_pathogenic | 0.7147 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.