Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32242 | 96949;96950;96951 | chr2:178543249;178543248;178543247 | chr2:179407976;179407975;179407974 |
N2AB | 30601 | 92026;92027;92028 | chr2:178543249;178543248;178543247 | chr2:179407976;179407975;179407974 |
N2A | 29674 | 89245;89246;89247 | chr2:178543249;178543248;178543247 | chr2:179407976;179407975;179407974 |
N2B | 23177 | 69754;69755;69756 | chr2:178543249;178543248;178543247 | chr2:179407976;179407975;179407974 |
Novex-1 | 23302 | 70129;70130;70131 | chr2:178543249;178543248;178543247 | chr2:179407976;179407975;179407974 |
Novex-2 | 23369 | 70330;70331;70332 | chr2:178543249;178543248;178543247 | chr2:179407976;179407975;179407974 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.995 | N | 0.751 | 0.4 | 0.750831387573 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3234 | likely_benign | 0.288 | benign | -1.396 | Destabilizing | 0.702 | D | 0.533 | neutral | None | None | None | None | N |
C/D | 0.8821 | likely_pathogenic | 0.8403 | pathogenic | -1.056 | Destabilizing | 0.976 | D | 0.773 | deleterious | None | None | None | None | N |
C/E | 0.8142 | likely_pathogenic | 0.7773 | pathogenic | -0.81 | Destabilizing | 0.976 | D | 0.778 | deleterious | None | None | None | None | N |
C/F | 0.3449 | ambiguous | 0.2972 | benign | -0.882 | Destabilizing | 0.984 | D | 0.747 | deleterious | N | 0.471399718 | None | None | N |
C/G | 0.224 | likely_benign | 0.1799 | benign | -1.754 | Destabilizing | 0.811 | D | 0.749 | deleterious | N | 0.516478647 | None | None | N |
C/H | 0.5486 | ambiguous | 0.4927 | ambiguous | -2.013 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
C/I | 0.6481 | likely_pathogenic | 0.6093 | pathogenic | -0.422 | Destabilizing | 0.988 | D | 0.734 | prob.delet. | None | None | None | None | N |
C/K | 0.6483 | likely_pathogenic | 0.592 | pathogenic | -0.5 | Destabilizing | 0.976 | D | 0.771 | deleterious | None | None | None | None | N |
C/L | 0.4375 | ambiguous | 0.3857 | ambiguous | -0.422 | Destabilizing | 0.919 | D | 0.674 | neutral | None | None | None | None | N |
C/M | 0.5626 | ambiguous | 0.5372 | ambiguous | 0.283 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
C/N | 0.5766 | likely_pathogenic | 0.4773 | ambiguous | -1.144 | Destabilizing | 0.976 | D | 0.777 | deleterious | None | None | None | None | N |
C/P | 0.99 | likely_pathogenic | 0.9862 | pathogenic | -0.726 | Destabilizing | 0.988 | D | 0.811 | deleterious | None | None | None | None | N |
C/Q | 0.3933 | ambiguous | 0.3736 | ambiguous | -0.618 | Destabilizing | 0.988 | D | 0.817 | deleterious | None | None | None | None | N |
C/R | 0.3001 | likely_benign | 0.2745 | benign | -1.131 | Destabilizing | 0.968 | D | 0.813 | deleterious | N | 0.383873947 | None | None | N |
C/S | 0.2553 | likely_benign | 0.1992 | benign | -1.409 | Destabilizing | 0.046 | N | 0.402 | neutral | N | 0.462950806 | None | None | N |
C/T | 0.5336 | ambiguous | 0.4672 | ambiguous | -0.973 | Destabilizing | 0.851 | D | 0.673 | neutral | None | None | None | None | N |
C/V | 0.4879 | ambiguous | 0.4645 | ambiguous | -0.726 | Destabilizing | 0.919 | D | 0.707 | prob.neutral | None | None | None | None | N |
C/W | 0.6769 | likely_pathogenic | 0.6187 | pathogenic | -1.278 | Destabilizing | 0.999 | D | 0.749 | deleterious | N | 0.497199453 | None | None | N |
C/Y | 0.4298 | ambiguous | 0.359 | ambiguous | -1.036 | Destabilizing | 0.995 | D | 0.751 | deleterious | N | 0.481827355 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.