Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32243 | 96952;96953;96954 | chr2:178543246;178543245;178543244 | chr2:179407973;179407972;179407971 |
N2AB | 30602 | 92029;92030;92031 | chr2:178543246;178543245;178543244 | chr2:179407973;179407972;179407971 |
N2A | 29675 | 89248;89249;89250 | chr2:178543246;178543245;178543244 | chr2:179407973;179407972;179407971 |
N2B | 23178 | 69757;69758;69759 | chr2:178543246;178543245;178543244 | chr2:179407973;179407972;179407971 |
Novex-1 | 23303 | 70132;70133;70134 | chr2:178543246;178543245;178543244 | chr2:179407973;179407972;179407971 |
Novex-2 | 23370 | 70333;70334;70335 | chr2:178543246;178543245;178543244 | chr2:179407973;179407972;179407971 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.638 | N | 0.601 | 0.109 | 0.19670166235 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5467 | ambiguous | 0.5131 | ambiguous | -0.43 | Destabilizing | 0.399 | N | 0.514 | neutral | None | None | None | None | N |
K/C | 0.8072 | likely_pathogenic | 0.787 | pathogenic | -0.388 | Destabilizing | 0.982 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/D | 0.8945 | likely_pathogenic | 0.8778 | pathogenic | 0.086 | Stabilizing | 0.7 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/E | 0.4022 | ambiguous | 0.3681 | ambiguous | 0.159 | Stabilizing | 0.201 | N | 0.442 | neutral | N | 0.462548161 | None | None | N |
K/F | 0.9022 | likely_pathogenic | 0.8707 | pathogenic | -0.336 | Destabilizing | 0.947 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/G | 0.6999 | likely_pathogenic | 0.6611 | pathogenic | -0.74 | Destabilizing | 0.7 | D | 0.588 | neutral | None | None | None | None | N |
K/H | 0.5037 | ambiguous | 0.4853 | ambiguous | -1.109 | Destabilizing | 0.947 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/I | 0.5546 | ambiguous | 0.5002 | ambiguous | 0.344 | Stabilizing | 0.781 | D | 0.771 | deleterious | N | 0.519983099 | None | None | N |
K/L | 0.4732 | ambiguous | 0.4333 | ambiguous | 0.344 | Stabilizing | 0.7 | D | 0.588 | neutral | None | None | None | None | N |
K/M | 0.4213 | ambiguous | 0.3907 | ambiguous | 0.217 | Stabilizing | 0.982 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/N | 0.7952 | likely_pathogenic | 0.7733 | pathogenic | -0.157 | Destabilizing | 0.638 | D | 0.601 | neutral | N | 0.491294987 | None | None | N |
K/P | 0.615 | likely_pathogenic | 0.6199 | pathogenic | 0.117 | Stabilizing | 0.826 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/Q | 0.2167 | likely_benign | 0.2125 | benign | -0.254 | Destabilizing | 0.468 | N | 0.597 | neutral | N | 0.482270072 | None | None | N |
K/R | 0.0774 | likely_benign | 0.0767 | benign | -0.417 | Destabilizing | 0.002 | N | 0.175 | neutral | N | 0.471074431 | None | None | N |
K/S | 0.7328 | likely_pathogenic | 0.7002 | pathogenic | -0.778 | Destabilizing | 0.399 | N | 0.536 | neutral | None | None | None | None | N |
K/T | 0.4323 | ambiguous | 0.409 | ambiguous | -0.51 | Destabilizing | 0.638 | D | 0.637 | neutral | N | 0.49579673 | None | None | N |
K/V | 0.4838 | ambiguous | 0.4359 | ambiguous | 0.117 | Stabilizing | 0.7 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/W | 0.8624 | likely_pathogenic | 0.837 | pathogenic | -0.247 | Destabilizing | 0.982 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/Y | 0.8284 | likely_pathogenic | 0.7922 | pathogenic | 0.055 | Stabilizing | 0.826 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.