Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32245 | 96958;96959;96960 | chr2:178543240;178543239;178543238 | chr2:179407967;179407966;179407965 |
N2AB | 30604 | 92035;92036;92037 | chr2:178543240;178543239;178543238 | chr2:179407967;179407966;179407965 |
N2A | 29677 | 89254;89255;89256 | chr2:178543240;178543239;178543238 | chr2:179407967;179407966;179407965 |
N2B | 23180 | 69763;69764;69765 | chr2:178543240;178543239;178543238 | chr2:179407967;179407966;179407965 |
Novex-1 | 23305 | 70138;70139;70140 | chr2:178543240;178543239;178543238 | chr2:179407967;179407966;179407965 |
Novex-2 | 23372 | 70339;70340;70341 | chr2:178543240;178543239;178543238 | chr2:179407967;179407966;179407965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1559120718 | None | 0.986 | N | 0.554 | 0.326 | 0.363158594168 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65563E-04 |
G/S | rs1559120718 | None | 0.986 | N | 0.554 | 0.326 | 0.363158594168 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3217 | likely_benign | 0.2656 | benign | -0.332 | Destabilizing | 0.976 | D | 0.509 | neutral | N | 0.499647899 | None | None | N |
G/C | 0.519 | ambiguous | 0.4555 | ambiguous | -0.973 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | D | 0.526142984 | None | None | N |
G/D | 0.3313 | likely_benign | 0.2739 | benign | -0.782 | Destabilizing | 0.388 | N | 0.52 | neutral | N | 0.492199065 | None | None | N |
G/E | 0.447 | ambiguous | 0.3919 | ambiguous | -0.938 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/F | 0.8422 | likely_pathogenic | 0.7914 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/H | 0.6114 | likely_pathogenic | 0.5531 | ambiguous | -0.404 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
G/I | 0.722 | likely_pathogenic | 0.6496 | pathogenic | -0.596 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
G/K | 0.6823 | likely_pathogenic | 0.6415 | pathogenic | -0.779 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
G/L | 0.7816 | likely_pathogenic | 0.7188 | pathogenic | -0.596 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
G/M | 0.787 | likely_pathogenic | 0.731 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/N | 0.3665 | ambiguous | 0.3026 | benign | -0.445 | Destabilizing | 0.998 | D | 0.566 | neutral | None | None | None | None | N |
G/P | 0.9374 | likely_pathogenic | 0.9181 | pathogenic | -0.485 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
G/Q | 0.5429 | ambiguous | 0.4943 | ambiguous | -0.722 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
G/R | 0.5627 | ambiguous | 0.516 | ambiguous | -0.336 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.48172804 | None | None | N |
G/S | 0.1724 | likely_benign | 0.1432 | benign | -0.567 | Destabilizing | 0.986 | D | 0.554 | neutral | N | 0.517558869 | None | None | N |
G/T | 0.3882 | ambiguous | 0.3237 | benign | -0.667 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
G/V | 0.5682 | likely_pathogenic | 0.4918 | ambiguous | -0.485 | Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.47953922 | None | None | N |
G/W | 0.7315 | likely_pathogenic | 0.6978 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
G/Y | 0.7535 | likely_pathogenic | 0.6874 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.