Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32247 | 96964;96965;96966 | chr2:178543234;178543233;178543232 | chr2:179407961;179407960;179407959 |
N2AB | 30606 | 92041;92042;92043 | chr2:178543234;178543233;178543232 | chr2:179407961;179407960;179407959 |
N2A | 29679 | 89260;89261;89262 | chr2:178543234;178543233;178543232 | chr2:179407961;179407960;179407959 |
N2B | 23182 | 69769;69770;69771 | chr2:178543234;178543233;178543232 | chr2:179407961;179407960;179407959 |
Novex-1 | 23307 | 70144;70145;70146 | chr2:178543234;178543233;178543232 | chr2:179407961;179407960;179407959 |
Novex-2 | 23374 | 70345;70346;70347 | chr2:178543234;178543233;178543232 | chr2:179407961;179407960;179407959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.896 | N | 0.355 | 0.287 | 0.300449992093 | gnomAD-4.0.0 | 3.18231E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86549E-05 | 0 |
E/Q | rs1695477466 | None | 0.946 | N | 0.319 | 0.243 | 0.328752806141 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1695477466 | None | 0.946 | N | 0.319 | 0.243 | 0.328752806141 | gnomAD-4.0.0 | 6.57557E-06 | None | None | None | None | N | None | 0 | 6.5591E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1979 | likely_benign | 0.1825 | benign | -0.084 | Destabilizing | 0.896 | D | 0.379 | neutral | N | 0.45156595 | None | None | N |
E/C | 0.8794 | likely_pathogenic | 0.8571 | pathogenic | -0.252 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
E/D | 0.0922 | likely_benign | 0.0797 | benign | -0.227 | Destabilizing | 0.004 | N | 0.213 | neutral | N | 0.369123499 | None | None | N |
E/F | 0.8327 | likely_pathogenic | 0.7988 | pathogenic | -0.115 | Destabilizing | 0.996 | D | 0.539 | neutral | None | None | None | None | N |
E/G | 0.1515 | likely_benign | 0.14 | benign | -0.198 | Destabilizing | 0.896 | D | 0.393 | neutral | N | 0.41791195 | None | None | N |
E/H | 0.527 | ambiguous | 0.4978 | ambiguous | 0.511 | Stabilizing | 0.996 | D | 0.349 | neutral | None | None | None | None | N |
E/I | 0.5676 | likely_pathogenic | 0.5087 | ambiguous | 0.159 | Stabilizing | 0.988 | D | 0.531 | neutral | None | None | None | None | N |
E/K | 0.2252 | likely_benign | 0.2038 | benign | 0.31 | Stabilizing | 0.896 | D | 0.355 | neutral | N | 0.44502398 | None | None | N |
E/L | 0.5126 | ambiguous | 0.47 | ambiguous | 0.159 | Stabilizing | 0.988 | D | 0.534 | neutral | None | None | None | None | N |
E/M | 0.5909 | likely_pathogenic | 0.5529 | ambiguous | -0.07 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
E/N | 0.2302 | likely_benign | 0.1968 | benign | 0.125 | Stabilizing | 0.851 | D | 0.332 | neutral | None | None | None | None | N |
E/P | 0.4436 | ambiguous | 0.427 | ambiguous | 0.095 | Stabilizing | 0.988 | D | 0.388 | neutral | None | None | None | None | N |
E/Q | 0.1795 | likely_benign | 0.1746 | benign | 0.137 | Stabilizing | 0.946 | D | 0.319 | neutral | N | 0.454200824 | None | None | N |
E/R | 0.3505 | ambiguous | 0.3277 | benign | 0.572 | Stabilizing | 0.988 | D | 0.347 | neutral | None | None | None | None | N |
E/S | 0.189 | likely_benign | 0.1711 | benign | -0.045 | Destabilizing | 0.919 | D | 0.346 | neutral | None | None | None | None | N |
E/T | 0.2539 | likely_benign | 0.2409 | benign | 0.055 | Stabilizing | 0.919 | D | 0.351 | neutral | None | None | None | None | N |
E/V | 0.3356 | likely_benign | 0.3038 | benign | 0.095 | Stabilizing | 0.984 | D | 0.441 | neutral | N | 0.466284687 | None | None | N |
E/W | 0.9145 | likely_pathogenic | 0.8956 | pathogenic | -0.062 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
E/Y | 0.708 | likely_pathogenic | 0.6608 | pathogenic | 0.105 | Stabilizing | 0.996 | D | 0.482 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.