Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32251 | 96976;96977;96978 | chr2:178543222;178543221;178543220 | chr2:179407949;179407948;179407947 |
N2AB | 30610 | 92053;92054;92055 | chr2:178543222;178543221;178543220 | chr2:179407949;179407948;179407947 |
N2A | 29683 | 89272;89273;89274 | chr2:178543222;178543221;178543220 | chr2:179407949;179407948;179407947 |
N2B | 23186 | 69781;69782;69783 | chr2:178543222;178543221;178543220 | chr2:179407949;179407948;179407947 |
Novex-1 | 23311 | 70156;70157;70158 | chr2:178543222;178543221;178543220 | chr2:179407949;179407948;179407947 |
Novex-2 | 23378 | 70357;70358;70359 | chr2:178543222;178543221;178543220 | chr2:179407949;179407948;179407947 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1327194086 | -0.227 | 0.134 | N | 0.19 | 0.109 | 0.168933306366 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/N | rs1327194086 | -0.227 | 0.134 | N | 0.19 | 0.109 | 0.168933306366 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs1327194086 | -0.227 | 0.134 | N | 0.19 | 0.109 | 0.168933306366 | gnomAD-4.0.0 | 2.56275E-06 | None | None | None | None | N | None | 3.38742E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.374 | ambiguous | 0.3225 | benign | -0.159 | Destabilizing | 0.863 | D | 0.443 | neutral | None | None | None | None | N |
K/C | 0.7346 | likely_pathogenic | 0.7158 | pathogenic | -0.405 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
K/D | 0.6062 | likely_pathogenic | 0.5674 | pathogenic | 0.134 | Stabilizing | 0.884 | D | 0.459 | neutral | None | None | None | None | N |
K/E | 0.2216 | likely_benign | 0.1908 | benign | 0.2 | Stabilizing | 0.92 | D | 0.414 | neutral | N | 0.467919482 | None | None | N |
K/F | 0.8783 | likely_pathogenic | 0.8317 | pathogenic | -0.012 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
K/G | 0.5693 | likely_pathogenic | 0.5167 | ambiguous | -0.458 | Destabilizing | 0.939 | D | 0.491 | neutral | None | None | None | None | N |
K/H | 0.3299 | likely_benign | 0.3144 | benign | -0.696 | Destabilizing | 0.991 | D | 0.537 | neutral | None | None | None | None | N |
K/I | 0.4738 | ambiguous | 0.4128 | ambiguous | 0.578 | Stabilizing | 0.884 | D | 0.549 | neutral | None | None | None | None | N |
K/L | 0.4224 | ambiguous | 0.3671 | ambiguous | 0.578 | Stabilizing | 0.759 | D | 0.475 | neutral | None | None | None | None | N |
K/M | 0.2797 | likely_benign | 0.2377 | benign | 0.251 | Stabilizing | 0.988 | D | 0.536 | neutral | N | 0.499050466 | None | None | N |
K/N | 0.4194 | ambiguous | 0.3723 | ambiguous | -0.125 | Destabilizing | 0.134 | N | 0.19 | neutral | N | 0.506763085 | None | None | N |
K/P | 0.4643 | ambiguous | 0.4407 | ambiguous | 0.363 | Stabilizing | 0.997 | D | 0.559 | neutral | None | None | None | None | N |
K/Q | 0.162 | likely_benign | 0.1507 | benign | -0.215 | Destabilizing | 0.988 | D | 0.499 | neutral | N | 0.476960253 | None | None | N |
K/R | 0.0932 | likely_benign | 0.0886 | benign | -0.327 | Destabilizing | 0.959 | D | 0.393 | neutral | N | 0.457259772 | None | None | N |
K/S | 0.4709 | ambiguous | 0.4206 | ambiguous | -0.694 | Destabilizing | 0.759 | D | 0.411 | neutral | None | None | None | None | N |
K/T | 0.1806 | likely_benign | 0.1513 | benign | -0.446 | Destabilizing | 0.061 | N | 0.233 | neutral | N | 0.426822221 | None | None | N |
K/V | 0.372 | ambiguous | 0.3279 | benign | 0.363 | Stabilizing | 0.17 | N | 0.339 | neutral | None | None | None | None | N |
K/W | 0.8351 | likely_pathogenic | 0.8046 | pathogenic | 0.043 | Stabilizing | 0.999 | D | 0.586 | neutral | None | None | None | None | N |
K/Y | 0.7182 | likely_pathogenic | 0.6705 | pathogenic | 0.349 | Stabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.