Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32252 | 96979;96980;96981 | chr2:178543219;178543218;178543217 | chr2:179407946;179407945;179407944 |
N2AB | 30611 | 92056;92057;92058 | chr2:178543219;178543218;178543217 | chr2:179407946;179407945;179407944 |
N2A | 29684 | 89275;89276;89277 | chr2:178543219;178543218;178543217 | chr2:179407946;179407945;179407944 |
N2B | 23187 | 69784;69785;69786 | chr2:178543219;178543218;178543217 | chr2:179407946;179407945;179407944 |
Novex-1 | 23312 | 70159;70160;70161 | chr2:178543219;178543218;178543217 | chr2:179407946;179407945;179407944 |
Novex-2 | 23379 | 70360;70361;70362 | chr2:178543219;178543218;178543217 | chr2:179407946;179407945;179407944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.02 | N | 0.239 | 0.1 | 0.570859980718 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/F | rs766999420 | -1.269 | 0.991 | N | 0.758 | 0.369 | 0.799625754913 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/F | rs766999420 | -1.269 | 0.991 | N | 0.758 | 0.369 | 0.799625754913 | gnomAD-4.0.0 | 4.77356E-06 | None | None | None | None | I | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86541E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2283 | likely_benign | 0.2123 | benign | -1.168 | Destabilizing | 0.02 | N | 0.239 | neutral | N | 0.451640521 | None | None | I |
V/C | 0.8163 | likely_pathogenic | 0.8194 | pathogenic | -0.947 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | I |
V/D | 0.8635 | likely_pathogenic | 0.8523 | pathogenic | -1.03 | Destabilizing | 0.991 | D | 0.79 | deleterious | N | 0.491852896 | None | None | I |
V/E | 0.7849 | likely_pathogenic | 0.7598 | pathogenic | -1.033 | Destabilizing | 0.986 | D | 0.705 | prob.neutral | None | None | None | None | I |
V/F | 0.3775 | ambiguous | 0.3626 | ambiguous | -0.876 | Destabilizing | 0.991 | D | 0.758 | deleterious | N | 0.471395238 | None | None | I |
V/G | 0.4365 | ambiguous | 0.4299 | ambiguous | -1.459 | Destabilizing | 0.885 | D | 0.676 | prob.neutral | N | 0.486029999 | None | None | I |
V/H | 0.8992 | likely_pathogenic | 0.8924 | pathogenic | -0.886 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | I |
V/I | 0.0981 | likely_benign | 0.0931 | benign | -0.48 | Destabilizing | 0.863 | D | 0.502 | neutral | N | 0.479885915 | None | None | I |
V/K | 0.8447 | likely_pathogenic | 0.8362 | pathogenic | -1.143 | Destabilizing | 0.986 | D | 0.726 | prob.delet. | None | None | None | None | I |
V/L | 0.3473 | ambiguous | 0.3361 | benign | -0.48 | Destabilizing | 0.863 | D | 0.505 | neutral | N | 0.49739424 | None | None | I |
V/M | 0.2398 | likely_benign | 0.2197 | benign | -0.494 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | I |
V/N | 0.746 | likely_pathogenic | 0.7226 | pathogenic | -1.026 | Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | I |
V/P | 0.8955 | likely_pathogenic | 0.8944 | pathogenic | -0.674 | Destabilizing | 0.993 | D | 0.756 | deleterious | None | None | None | None | I |
V/Q | 0.7962 | likely_pathogenic | 0.7802 | pathogenic | -1.153 | Destabilizing | 0.993 | D | 0.783 | deleterious | None | None | None | None | I |
V/R | 0.7938 | likely_pathogenic | 0.7888 | pathogenic | -0.62 | Destabilizing | 0.993 | D | 0.811 | deleterious | None | None | None | None | I |
V/S | 0.5019 | ambiguous | 0.4737 | ambiguous | -1.49 | Destabilizing | 0.91 | D | 0.621 | neutral | None | None | None | None | I |
V/T | 0.2801 | likely_benign | 0.2625 | benign | -1.373 | Destabilizing | 0.953 | D | 0.49 | neutral | None | None | None | None | I |
V/W | 0.9379 | likely_pathogenic | 0.9386 | pathogenic | -1.056 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | I |
V/Y | 0.7902 | likely_pathogenic | 0.7853 | pathogenic | -0.758 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.