Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32260 | 97003;97004;97005 | chr2:178543195;178543194;178543193 | chr2:179407922;179407921;179407920 |
N2AB | 30619 | 92080;92081;92082 | chr2:178543195;178543194;178543193 | chr2:179407922;179407921;179407920 |
N2A | 29692 | 89299;89300;89301 | chr2:178543195;178543194;178543193 | chr2:179407922;179407921;179407920 |
N2B | 23195 | 69808;69809;69810 | chr2:178543195;178543194;178543193 | chr2:179407922;179407921;179407920 |
Novex-1 | 23320 | 70183;70184;70185 | chr2:178543195;178543194;178543193 | chr2:179407922;179407921;179407920 |
Novex-2 | 23387 | 70384;70385;70386 | chr2:178543195;178543194;178543193 | chr2:179407922;179407921;179407920 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1695466303 | None | 0.801 | N | 0.401 | 0.161 | 0.408714661073 | gnomAD-4.0.0 | 1.36841E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79893E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.175 | likely_benign | 0.1826 | benign | -1.789 | Destabilizing | 0.525 | D | 0.402 | neutral | None | None | None | None | I |
L/C | 0.3499 | ambiguous | 0.3512 | ambiguous | -0.962 | Destabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | I |
L/D | 0.6239 | likely_pathogenic | 0.6429 | pathogenic | -1.641 | Destabilizing | 0.949 | D | 0.589 | neutral | None | None | None | None | I |
L/E | 0.3211 | likely_benign | 0.3492 | ambiguous | -1.476 | Destabilizing | 0.949 | D | 0.579 | neutral | None | None | None | None | I |
L/F | 0.1176 | likely_benign | 0.1225 | benign | -1.009 | Destabilizing | 0.007 | N | 0.2 | neutral | None | None | None | None | I |
L/G | 0.3244 | likely_benign | 0.3435 | ambiguous | -2.25 | Highly Destabilizing | 0.842 | D | 0.503 | neutral | None | None | None | None | I |
L/H | 0.1779 | likely_benign | 0.201 | benign | -1.507 | Destabilizing | 0.949 | D | 0.583 | neutral | None | None | None | None | I |
L/I | 0.1405 | likely_benign | 0.1411 | benign | -0.511 | Destabilizing | 0.669 | D | 0.388 | neutral | N | 0.473317341 | None | None | I |
L/K | 0.1752 | likely_benign | 0.2157 | benign | -1.243 | Destabilizing | 0.842 | D | 0.556 | neutral | None | None | None | None | I |
L/M | 0.1033 | likely_benign | 0.1066 | benign | -0.403 | Destabilizing | 0.974 | D | 0.507 | neutral | None | None | None | None | I |
L/N | 0.2916 | likely_benign | 0.3207 | benign | -1.455 | Destabilizing | 0.949 | D | 0.59 | neutral | None | None | None | None | I |
L/P | 0.1767 | likely_benign | 0.1878 | benign | -0.912 | Destabilizing | 0.966 | D | 0.583 | neutral | N | 0.493601787 | None | None | I |
L/Q | 0.1043 | likely_benign | 0.1207 | benign | -1.397 | Destabilizing | 0.966 | D | 0.57 | neutral | N | 0.46729018 | None | None | I |
L/R | 0.122 | likely_benign | 0.1466 | benign | -0.907 | Destabilizing | 0.966 | D | 0.568 | neutral | N | 0.505376219 | None | None | I |
L/S | 0.1973 | likely_benign | 0.2006 | benign | -2.116 | Highly Destabilizing | 0.172 | N | 0.411 | neutral | None | None | None | None | I |
L/T | 0.122 | likely_benign | 0.1256 | benign | -1.813 | Destabilizing | 0.728 | D | 0.406 | neutral | None | None | None | None | I |
L/V | 0.1101 | likely_benign | 0.112 | benign | -0.912 | Destabilizing | 0.801 | D | 0.401 | neutral | N | 0.471342331 | None | None | I |
L/W | 0.1778 | likely_benign | 0.1891 | benign | -1.306 | Destabilizing | 0.993 | D | 0.567 | neutral | None | None | None | None | I |
L/Y | 0.263 | likely_benign | 0.2861 | benign | -0.958 | Destabilizing | 0.016 | N | 0.322 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.