Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32262 | 97009;97010;97011 | chr2:178543189;178543188;178543187 | chr2:179407916;179407915;179407914 |
N2AB | 30621 | 92086;92087;92088 | chr2:178543189;178543188;178543187 | chr2:179407916;179407915;179407914 |
N2A | 29694 | 89305;89306;89307 | chr2:178543189;178543188;178543187 | chr2:179407916;179407915;179407914 |
N2B | 23197 | 69814;69815;69816 | chr2:178543189;178543188;178543187 | chr2:179407916;179407915;179407914 |
Novex-1 | 23322 | 70189;70190;70191 | chr2:178543189;178543188;178543187 | chr2:179407916;179407915;179407914 |
Novex-2 | 23389 | 70390;70391;70392 | chr2:178543189;178543188;178543187 | chr2:179407916;179407915;179407914 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs1376767409 | -2.122 | 0.961 | N | 0.466 | 0.318 | 0.297718772494 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
H/N | rs1376767409 | -2.122 | 0.961 | N | 0.466 | 0.318 | 0.297718772494 | gnomAD-4.0.0 | 2.05265E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69843E-06 | 0 | 0 |
H/Y | None | None | 0.012 | N | 0.243 | 0.273 | 0.180583059064 | gnomAD-4.0.0 | 6.84217E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4754 | ambiguous | 0.4583 | ambiguous | -1.835 | Destabilizing | 0.842 | D | 0.546 | neutral | None | None | None | None | N |
H/C | 0.2184 | likely_benign | 0.2091 | benign | -1.156 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
H/D | 0.6218 | likely_pathogenic | 0.6005 | pathogenic | -1.892 | Destabilizing | 0.989 | D | 0.539 | neutral | N | 0.513574414 | None | None | N |
H/E | 0.61 | likely_pathogenic | 0.6027 | pathogenic | -1.697 | Destabilizing | 0.915 | D | 0.457 | neutral | None | None | None | None | N |
H/F | 0.3253 | likely_benign | 0.3262 | benign | -0.04 | Destabilizing | 0.016 | N | 0.403 | neutral | None | None | None | None | N |
H/G | 0.5264 | ambiguous | 0.5004 | ambiguous | -2.265 | Highly Destabilizing | 0.915 | D | 0.538 | neutral | None | None | None | None | N |
H/I | 0.5882 | likely_pathogenic | 0.5727 | pathogenic | -0.561 | Destabilizing | 0.949 | D | 0.641 | neutral | None | None | None | None | N |
H/K | 0.5241 | ambiguous | 0.5334 | ambiguous | -1.247 | Destabilizing | 0.974 | D | 0.532 | neutral | None | None | None | None | N |
H/L | 0.2864 | likely_benign | 0.2721 | benign | -0.561 | Destabilizing | 0.669 | D | 0.607 | neutral | N | 0.404673294 | None | None | N |
H/M | 0.6279 | likely_pathogenic | 0.6255 | pathogenic | -0.811 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | N |
H/N | 0.2251 | likely_benign | 0.2156 | benign | -2.057 | Highly Destabilizing | 0.961 | D | 0.466 | neutral | N | 0.513574414 | None | None | N |
H/P | 0.8693 | likely_pathogenic | 0.8798 | pathogenic | -0.976 | Destabilizing | 0.989 | D | 0.649 | neutral | N | 0.47038128 | None | None | N |
H/Q | 0.3595 | ambiguous | 0.3467 | ambiguous | -1.703 | Destabilizing | 0.989 | D | 0.47 | neutral | N | 0.494988654 | None | None | N |
H/R | 0.3043 | likely_benign | 0.2988 | benign | -1.505 | Destabilizing | 0.966 | D | 0.463 | neutral | N | 0.47012779 | None | None | N |
H/S | 0.4286 | ambiguous | 0.4176 | ambiguous | -2.159 | Highly Destabilizing | 0.915 | D | 0.495 | neutral | None | None | None | None | N |
H/T | 0.4696 | ambiguous | 0.4731 | ambiguous | -1.825 | Destabilizing | 0.974 | D | 0.569 | neutral | None | None | None | None | N |
H/V | 0.4632 | ambiguous | 0.4561 | ambiguous | -0.976 | Destabilizing | 0.842 | D | 0.631 | neutral | None | None | None | None | N |
H/W | 0.5423 | ambiguous | 0.5572 | ambiguous | 0.627 | Stabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | N |
H/Y | 0.0855 | likely_benign | 0.088 | benign | 0.377 | Stabilizing | 0.012 | N | 0.243 | neutral | N | 0.361554448 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.