Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32264 | 97015;97016;97017 | chr2:178543183;178543182;178543181 | chr2:179407910;179407909;179407908 |
N2AB | 30623 | 92092;92093;92094 | chr2:178543183;178543182;178543181 | chr2:179407910;179407909;179407908 |
N2A | 29696 | 89311;89312;89313 | chr2:178543183;178543182;178543181 | chr2:179407910;179407909;179407908 |
N2B | 23199 | 69820;69821;69822 | chr2:178543183;178543182;178543181 | chr2:179407910;179407909;179407908 |
Novex-1 | 23324 | 70195;70196;70197 | chr2:178543183;178543182;178543181 | chr2:179407910;179407909;179407908 |
Novex-2 | 23391 | 70396;70397;70398 | chr2:178543183;178543182;178543181 | chr2:179407910;179407909;179407908 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.004 | N | 0.203 | 0.106 | 0.412715890961 | gnomAD-4.0.0 | 6.8424E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99522E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5264 | ambiguous | 0.5457 | ambiguous | -1.925 | Destabilizing | 0.78 | D | 0.716 | prob.delet. | N | 0.508616886 | None | None | N |
V/C | 0.8737 | likely_pathogenic | 0.8857 | pathogenic | -1.74 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
V/D | 0.9641 | likely_pathogenic | 0.9733 | pathogenic | -2.267 | Highly Destabilizing | 0.995 | D | 0.857 | deleterious | N | 0.476682519 | None | None | N |
V/E | 0.9259 | likely_pathogenic | 0.9356 | pathogenic | -2.042 | Highly Destabilizing | 0.996 | D | 0.825 | deleterious | None | None | None | None | N |
V/F | 0.4076 | ambiguous | 0.4345 | ambiguous | -1.243 | Destabilizing | 0.968 | D | 0.808 | deleterious | N | 0.495036582 | None | None | N |
V/G | 0.7958 | likely_pathogenic | 0.8221 | pathogenic | -2.483 | Highly Destabilizing | 0.995 | D | 0.81 | deleterious | D | 0.528299486 | None | None | N |
V/H | 0.96 | likely_pathogenic | 0.9671 | pathogenic | -2.3 | Highly Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
V/I | 0.075 | likely_benign | 0.0752 | benign | -0.374 | Destabilizing | 0.004 | N | 0.203 | neutral | N | 0.459897432 | None | None | N |
V/K | 0.9452 | likely_pathogenic | 0.9526 | pathogenic | -1.621 | Destabilizing | 0.988 | D | 0.829 | deleterious | None | None | None | None | N |
V/L | 0.2854 | likely_benign | 0.2944 | benign | -0.374 | Destabilizing | 0.437 | N | 0.407 | neutral | N | 0.461817442 | None | None | N |
V/M | 0.2915 | likely_benign | 0.3057 | benign | -0.513 | Destabilizing | 0.976 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/N | 0.9055 | likely_pathogenic | 0.9292 | pathogenic | -1.951 | Destabilizing | 0.996 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.946 | likely_pathogenic | 0.9578 | pathogenic | -0.862 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
V/Q | 0.9182 | likely_pathogenic | 0.9305 | pathogenic | -1.75 | Destabilizing | 0.996 | D | 0.83 | deleterious | None | None | None | None | N |
V/R | 0.9173 | likely_pathogenic | 0.9312 | pathogenic | -1.57 | Destabilizing | 0.996 | D | 0.858 | deleterious | None | None | None | None | N |
V/S | 0.8008 | likely_pathogenic | 0.8283 | pathogenic | -2.626 | Highly Destabilizing | 0.988 | D | 0.797 | deleterious | None | None | None | None | N |
V/T | 0.7082 | likely_pathogenic | 0.7357 | pathogenic | -2.229 | Highly Destabilizing | 0.919 | D | 0.724 | prob.delet. | None | None | None | None | N |
V/W | 0.9626 | likely_pathogenic | 0.9681 | pathogenic | -1.698 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
V/Y | 0.8665 | likely_pathogenic | 0.8897 | pathogenic | -1.292 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.