Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32268 | 97027;97028;97029 | chr2:178543171;178543170;178543169 | chr2:179407898;179407897;179407896 |
N2AB | 30627 | 92104;92105;92106 | chr2:178543171;178543170;178543169 | chr2:179407898;179407897;179407896 |
N2A | 29700 | 89323;89324;89325 | chr2:178543171;178543170;178543169 | chr2:179407898;179407897;179407896 |
N2B | 23203 | 69832;69833;69834 | chr2:178543171;178543170;178543169 | chr2:179407898;179407897;179407896 |
Novex-1 | 23328 | 70207;70208;70209 | chr2:178543171;178543170;178543169 | chr2:179407898;179407897;179407896 |
Novex-2 | 23395 | 70408;70409;70410 | chr2:178543171;178543170;178543169 | chr2:179407898;179407897;179407896 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.996 | N | 0.371 | 0.343 | 0.283371740733 | gnomAD-4.0.0 | 2.40067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62503E-06 | 0 | 0 |
N/S | rs769680688 | -0.447 | 0.704 | N | 0.322 | 0.119 | 0.166414681773 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.44E-05 | 0 |
N/S | rs769680688 | -0.447 | 0.704 | N | 0.322 | 0.119 | 0.166414681773 | gnomAD-4.0.0 | 2.53185E-05 | None | None | None | None | N | None | 2.98864E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.14855E-05 | 0 | 1.65689E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1967 | likely_benign | 0.1715 | benign | -0.725 | Destabilizing | 0.863 | D | 0.377 | neutral | None | None | None | None | N |
N/C | 0.2786 | likely_benign | 0.2522 | benign | 0.081 | Stabilizing | 0.999 | D | 0.404 | neutral | None | None | None | None | N |
N/D | 0.2507 | likely_benign | 0.2247 | benign | 0.212 | Stabilizing | 0.959 | D | 0.313 | neutral | N | 0.487022531 | None | None | N |
N/E | 0.3846 | ambiguous | 0.3635 | ambiguous | 0.243 | Stabilizing | 0.969 | D | 0.286 | neutral | None | None | None | None | N |
N/F | 0.5586 | ambiguous | 0.4936 | ambiguous | -0.871 | Destabilizing | 0.982 | D | 0.431 | neutral | None | None | None | None | N |
N/G | 0.2734 | likely_benign | 0.241 | benign | -0.971 | Destabilizing | 0.969 | D | 0.29 | neutral | None | None | None | None | N |
N/H | 0.0911 | likely_benign | 0.0875 | benign | -0.757 | Destabilizing | 0.996 | D | 0.371 | neutral | N | 0.508187237 | None | None | N |
N/I | 0.1989 | likely_benign | 0.1623 | benign | -0.141 | Destabilizing | 0.852 | D | 0.413 | neutral | N | 0.451544521 | None | None | N |
N/K | 0.246 | likely_benign | 0.2383 | benign | 0.079 | Stabilizing | 0.92 | D | 0.285 | neutral | N | 0.437361715 | None | None | N |
N/L | 0.1925 | likely_benign | 0.1675 | benign | -0.141 | Destabilizing | 0.759 | D | 0.4 | neutral | None | None | None | None | N |
N/M | 0.2885 | likely_benign | 0.2445 | benign | 0.174 | Stabilizing | 0.579 | D | 0.385 | neutral | None | None | None | None | N |
N/P | 0.5198 | ambiguous | 0.4658 | ambiguous | -0.307 | Destabilizing | 0.997 | D | 0.423 | neutral | None | None | None | None | N |
N/Q | 0.2559 | likely_benign | 0.2415 | benign | -0.475 | Destabilizing | 0.991 | D | 0.349 | neutral | None | None | None | None | N |
N/R | 0.2469 | likely_benign | 0.2516 | benign | 0.113 | Stabilizing | 0.969 | D | 0.351 | neutral | None | None | None | None | N |
N/S | 0.0833 | likely_benign | 0.0785 | benign | -0.458 | Destabilizing | 0.704 | D | 0.322 | neutral | N | 0.464588389 | None | None | N |
N/T | 0.1034 | likely_benign | 0.0942 | benign | -0.239 | Destabilizing | 0.061 | N | 0.079 | neutral | N | 0.424395205 | None | None | N |
N/V | 0.1924 | likely_benign | 0.1624 | benign | -0.307 | Destabilizing | 0.884 | D | 0.404 | neutral | None | None | None | None | N |
N/W | 0.7089 | likely_pathogenic | 0.6777 | pathogenic | -0.704 | Destabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | N |
N/Y | 0.1835 | likely_benign | 0.1752 | benign | -0.472 | Destabilizing | 0.996 | D | 0.421 | neutral | N | 0.469558359 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.