Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32271 | 97036;97037;97038 | chr2:178543162;178543161;178543160 | chr2:179407889;179407888;179407887 |
N2AB | 30630 | 92113;92114;92115 | chr2:178543162;178543161;178543160 | chr2:179407889;179407888;179407887 |
N2A | 29703 | 89332;89333;89334 | chr2:178543162;178543161;178543160 | chr2:179407889;179407888;179407887 |
N2B | 23206 | 69841;69842;69843 | chr2:178543162;178543161;178543160 | chr2:179407889;179407888;179407887 |
Novex-1 | 23331 | 70216;70217;70218 | chr2:178543162;178543161;178543160 | chr2:179407889;179407888;179407887 |
Novex-2 | 23398 | 70417;70418;70419 | chr2:178543162;178543161;178543160 | chr2:179407889;179407888;179407887 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1559120065 | None | 0.994 | N | 0.564 | 0.433 | 0.438806408302 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3228 | likely_benign | 0.2854 | benign | -0.807 | Destabilizing | 0.98 | D | 0.532 | neutral | N | 0.456064906 | None | None | N |
E/C | 0.9076 | likely_pathogenic | 0.8918 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/D | 0.2173 | likely_benign | 0.1914 | benign | -1.15 | Destabilizing | 0.004 | N | 0.174 | neutral | N | 0.478635121 | None | None | N |
E/F | 0.8799 | likely_pathogenic | 0.8506 | pathogenic | -0.218 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/G | 0.2782 | likely_benign | 0.2564 | benign | -1.18 | Destabilizing | 0.994 | D | 0.564 | neutral | N | 0.487331962 | None | None | N |
E/H | 0.6623 | likely_pathogenic | 0.6364 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
E/I | 0.7034 | likely_pathogenic | 0.6421 | pathogenic | 0.21 | Stabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/K | 0.3388 | likely_benign | 0.3303 | benign | -0.56 | Destabilizing | 0.989 | D | 0.499 | neutral | N | 0.453718034 | None | None | N |
E/L | 0.682 | likely_pathogenic | 0.6146 | pathogenic | 0.21 | Stabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/M | 0.6548 | likely_pathogenic | 0.6078 | pathogenic | 0.634 | Stabilizing | 0.997 | D | 0.675 | neutral | None | None | None | None | N |
E/N | 0.4529 | ambiguous | 0.404 | ambiguous | -1.067 | Destabilizing | 0.978 | D | 0.617 | neutral | None | None | None | None | N |
E/P | 0.9702 | likely_pathogenic | 0.9685 | pathogenic | -0.107 | Destabilizing | 0.989 | D | 0.647 | neutral | None | None | None | None | N |
E/Q | 0.1847 | likely_benign | 0.1807 | benign | -0.923 | Destabilizing | 0.996 | D | 0.636 | neutral | N | 0.440770167 | None | None | N |
E/R | 0.4907 | ambiguous | 0.4801 | ambiguous | -0.255 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
E/S | 0.3145 | likely_benign | 0.2758 | benign | -1.369 | Destabilizing | 0.969 | D | 0.497 | neutral | None | None | None | None | N |
E/T | 0.453 | ambiguous | 0.4093 | ambiguous | -1.058 | Destabilizing | 0.997 | D | 0.611 | neutral | None | None | None | None | N |
E/V | 0.4755 | ambiguous | 0.4242 | ambiguous | -0.107 | Destabilizing | 0.997 | D | 0.656 | neutral | N | 0.464839105 | None | None | N |
E/W | 0.9581 | likely_pathogenic | 0.9535 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/Y | 0.7934 | likely_pathogenic | 0.7634 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.