Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32287 | 97084;97085;97086 | chr2:178543114;178543113;178543112 | chr2:179407841;179407840;179407839 |
N2AB | 30646 | 92161;92162;92163 | chr2:178543114;178543113;178543112 | chr2:179407841;179407840;179407839 |
N2A | 29719 | 89380;89381;89382 | chr2:178543114;178543113;178543112 | chr2:179407841;179407840;179407839 |
N2B | 23222 | 69889;69890;69891 | chr2:178543114;178543113;178543112 | chr2:179407841;179407840;179407839 |
Novex-1 | 23347 | 70264;70265;70266 | chr2:178543114;178543113;178543112 | chr2:179407841;179407840;179407839 |
Novex-2 | 23414 | 70465;70466;70467 | chr2:178543114;178543113;178543112 | chr2:179407841;179407840;179407839 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.682 | 0.4 | 0.355865052028 | gnomAD-4.0.0 | 1.60118E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88309E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1802 | likely_benign | 0.1741 | benign | -0.572 | Destabilizing | 0.999 | D | 0.743 | deleterious | N | 0.489870835 | None | None | I |
E/C | 0.8856 | likely_pathogenic | 0.8929 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/D | 0.1312 | likely_benign | 0.1181 | benign | -0.494 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.461473513 | None | None | I |
E/F | 0.7803 | likely_pathogenic | 0.7854 | pathogenic | -0.291 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/G | 0.238 | likely_benign | 0.2341 | benign | -0.785 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.478761844 | None | None | I |
E/H | 0.5721 | likely_pathogenic | 0.5812 | pathogenic | 0.035 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
E/I | 0.416 | ambiguous | 0.3975 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
E/K | 0.208 | likely_benign | 0.2079 | benign | 0.133 | Stabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.462030873 | None | None | I |
E/L | 0.4031 | ambiguous | 0.3955 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
E/M | 0.5102 | ambiguous | 0.4952 | ambiguous | 0.043 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/N | 0.3379 | likely_benign | 0.3189 | benign | -0.333 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/P | 0.3941 | ambiguous | 0.4193 | ambiguous | -0.193 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/Q | 0.1747 | likely_benign | 0.1752 | benign | -0.284 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.50970739 | None | None | I |
E/R | 0.3533 | ambiguous | 0.3746 | ambiguous | 0.454 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/S | 0.2447 | likely_benign | 0.2415 | benign | -0.482 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | I |
E/T | 0.3111 | likely_benign | 0.3031 | benign | -0.302 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
E/V | 0.2493 | likely_benign | 0.2384 | benign | -0.193 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.473383474 | None | None | I |
E/W | 0.9263 | likely_pathogenic | 0.9297 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
E/Y | 0.6598 | likely_pathogenic | 0.6566 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.