Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32288 | 97087;97088;97089 | chr2:178543111;178543110;178543109 | chr2:179407838;179407837;179407836 |
N2AB | 30647 | 92164;92165;92166 | chr2:178543111;178543110;178543109 | chr2:179407838;179407837;179407836 |
N2A | 29720 | 89383;89384;89385 | chr2:178543111;178543110;178543109 | chr2:179407838;179407837;179407836 |
N2B | 23223 | 69892;69893;69894 | chr2:178543111;178543110;178543109 | chr2:179407838;179407837;179407836 |
Novex-1 | 23348 | 70267;70268;70269 | chr2:178543111;178543110;178543109 | chr2:179407838;179407837;179407836 |
Novex-2 | 23415 | 70468;70469;70470 | chr2:178543111;178543110;178543109 | chr2:179407838;179407837;179407836 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.002 | N | 0.482 | 0.234 | 0.0846915920261 | gnomAD-4.0.0 | 4.11837E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.57805E-05 | None | 0 | 0 | 2.70704E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1049 | likely_benign | 0.0935 | benign | -1.742 | Destabilizing | 0.002 | N | 0.482 | neutral | N | 0.477063096 | None | None | I |
P/C | 0.7332 | likely_pathogenic | 0.6796 | pathogenic | -1.061 | Destabilizing | 0.962 | D | 0.873 | deleterious | None | None | None | None | I |
P/D | 0.8612 | likely_pathogenic | 0.8293 | pathogenic | -1.937 | Destabilizing | 0.452 | N | 0.779 | deleterious | None | None | None | None | I |
P/E | 0.7528 | likely_pathogenic | 0.7065 | pathogenic | -1.932 | Destabilizing | 0.567 | D | 0.759 | deleterious | None | None | None | None | I |
P/F | 0.7591 | likely_pathogenic | 0.6784 | pathogenic | -1.335 | Destabilizing | 0.997 | D | 0.879 | deleterious | None | None | None | None | I |
P/G | 0.4285 | ambiguous | 0.4067 | ambiguous | -2.05 | Highly Destabilizing | 0.546 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/H | 0.6922 | likely_pathogenic | 0.6149 | pathogenic | -1.529 | Destabilizing | 0.997 | D | 0.843 | deleterious | None | None | None | None | I |
P/I | 0.6485 | likely_pathogenic | 0.6036 | pathogenic | -0.979 | Destabilizing | 0.977 | D | 0.854 | deleterious | None | None | None | None | I |
P/K | 0.858 | likely_pathogenic | 0.83 | pathogenic | -1.492 | Destabilizing | 0.977 | D | 0.775 | deleterious | None | None | None | None | I |
P/L | 0.4188 | ambiguous | 0.3577 | ambiguous | -0.979 | Destabilizing | 0.94 | D | 0.781 | deleterious | N | 0.510789617 | None | None | I |
P/M | 0.654 | likely_pathogenic | 0.5893 | pathogenic | -0.695 | Destabilizing | 0.992 | D | 0.845 | deleterious | None | None | None | None | I |
P/N | 0.7868 | likely_pathogenic | 0.7353 | pathogenic | -1.318 | Destabilizing | 0.913 | D | 0.837 | deleterious | None | None | None | None | I |
P/Q | 0.6445 | likely_pathogenic | 0.5736 | pathogenic | -1.528 | Destabilizing | 0.96 | D | 0.813 | deleterious | D | 0.524173839 | None | None | I |
P/R | 0.7917 | likely_pathogenic | 0.7566 | pathogenic | -0.854 | Destabilizing | 0.969 | D | 0.837 | deleterious | N | 0.512310555 | None | None | I |
P/S | 0.2906 | likely_benign | 0.2458 | benign | -1.775 | Destabilizing | 0.815 | D | 0.701 | prob.neutral | N | 0.495180578 | None | None | I |
P/T | 0.3376 | likely_benign | 0.2866 | benign | -1.681 | Destabilizing | 0.662 | D | 0.705 | prob.neutral | N | 0.5171724 | None | None | I |
P/V | 0.4483 | ambiguous | 0.4192 | ambiguous | -1.201 | Destabilizing | 0.786 | D | 0.723 | prob.delet. | None | None | None | None | I |
P/W | 0.8651 | likely_pathogenic | 0.8191 | pathogenic | -1.544 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | I |
P/Y | 0.7707 | likely_pathogenic | 0.7022 | pathogenic | -1.289 | Destabilizing | 0.997 | D | 0.88 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.