Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32290 | 97093;97094;97095 | chr2:178543105;178543104;178543103 | chr2:179407832;179407831;179407830 |
N2AB | 30649 | 92170;92171;92172 | chr2:178543105;178543104;178543103 | chr2:179407832;179407831;179407830 |
N2A | 29722 | 89389;89390;89391 | chr2:178543105;178543104;178543103 | chr2:179407832;179407831;179407830 |
N2B | 23225 | 69898;69899;69900 | chr2:178543105;178543104;178543103 | chr2:179407832;179407831;179407830 |
Novex-1 | 23350 | 70273;70274;70275 | chr2:178543105;178543104;178543103 | chr2:179407832;179407831;179407830 |
Novex-2 | 23417 | 70474;70475;70476 | chr2:178543105;178543104;178543103 | chr2:179407832;179407831;179407830 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1060500512 | None | 0.953 | N | 0.535 | 0.285 | 0.383921772103 | gnomAD-4.0.0 | 1.37408E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80613E-06 | 0 | 0 |
E/Q | None | None | 0.976 | N | 0.621 | 0.174 | 0.259272394797 | gnomAD-4.0.0 | 6.87038E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16393E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3151 | likely_benign | 0.3063 | benign | -0.621 | Destabilizing | 0.976 | D | 0.579 | neutral | N | 0.511822188 | None | None | I |
E/C | 0.9295 | likely_pathogenic | 0.9259 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
E/D | 0.216 | likely_benign | 0.1917 | benign | -1.025 | Destabilizing | 0.026 | N | 0.16 | neutral | N | 0.483403436 | None | None | I |
E/F | 0.8986 | likely_pathogenic | 0.891 | pathogenic | 0.249 | Stabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | I |
E/G | 0.3336 | likely_benign | 0.3289 | benign | -1.036 | Destabilizing | 0.953 | D | 0.609 | neutral | N | 0.490091696 | None | None | I |
E/H | 0.7479 | likely_pathogenic | 0.7431 | pathogenic | 0.061 | Stabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | I |
E/I | 0.6011 | likely_pathogenic | 0.5742 | pathogenic | 0.527 | Stabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | I |
E/K | 0.3892 | ambiguous | 0.3868 | ambiguous | -0.521 | Destabilizing | 0.953 | D | 0.535 | neutral | N | 0.471987441 | None | None | I |
E/L | 0.6111 | likely_pathogenic | 0.5891 | pathogenic | 0.527 | Stabilizing | 0.995 | D | 0.74 | deleterious | None | None | None | None | I |
E/M | 0.6257 | likely_pathogenic | 0.6099 | pathogenic | 0.894 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
E/N | 0.4894 | ambiguous | 0.458 | ambiguous | -1.149 | Destabilizing | 0.964 | D | 0.6 | neutral | None | None | None | None | I |
E/P | 0.7191 | likely_pathogenic | 0.6933 | pathogenic | 0.166 | Stabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | I |
E/Q | 0.2373 | likely_benign | 0.2369 | benign | -0.947 | Destabilizing | 0.976 | D | 0.621 | neutral | N | 0.475189384 | None | None | I |
E/R | 0.5703 | likely_pathogenic | 0.5756 | pathogenic | -0.164 | Destabilizing | 0.995 | D | 0.572 | neutral | None | None | None | None | I |
E/S | 0.3948 | ambiguous | 0.3871 | ambiguous | -1.493 | Destabilizing | 0.964 | D | 0.501 | neutral | None | None | None | None | I |
E/T | 0.4276 | ambiguous | 0.4237 | ambiguous | -1.136 | Destabilizing | 0.982 | D | 0.663 | prob.neutral | None | None | None | None | I |
E/V | 0.3581 | ambiguous | 0.3419 | ambiguous | 0.166 | Stabilizing | 0.998 | D | 0.598 | neutral | N | 0.502530701 | None | None | I |
E/W | 0.9647 | likely_pathogenic | 0.9631 | pathogenic | 0.529 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
E/Y | 0.831 | likely_pathogenic | 0.8193 | pathogenic | 0.525 | Stabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.