Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32293 | 97102;97103;97104 | chr2:178543096;178543095;178543094 | chr2:179407823;179407822;179407821 |
N2AB | 30652 | 92179;92180;92181 | chr2:178543096;178543095;178543094 | chr2:179407823;179407822;179407821 |
N2A | 29725 | 89398;89399;89400 | chr2:178543096;178543095;178543094 | chr2:179407823;179407822;179407821 |
N2B | 23228 | 69907;69908;69909 | chr2:178543096;178543095;178543094 | chr2:179407823;179407822;179407821 |
Novex-1 | 23353 | 70282;70283;70284 | chr2:178543096;178543095;178543094 | chr2:179407823;179407822;179407821 |
Novex-2 | 23420 | 70483;70484;70485 | chr2:178543096;178543095;178543094 | chr2:179407823;179407822;179407821 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs200555813 | -0.014 | 0.999 | N | 0.735 | 0.38 | None | gnomAD-4.0.0 | 9.65802E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.26939E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0786 | likely_benign | 0.0746 | benign | -0.124 | Destabilizing | 0.603 | D | 0.283 | neutral | N | 0.473455801 | None | None | N |
T/C | 0.4316 | ambiguous | 0.3948 | ambiguous | -0.38 | Destabilizing | 1.0 | D | 0.699 | prob.delet. | None | None | None | None | N |
T/D | 0.4093 | ambiguous | 0.374 | ambiguous | 0.161 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/E | 0.3306 | likely_benign | 0.3203 | benign | 0.076 | Stabilizing | 0.999 | D | 0.701 | prob.delet. | None | None | None | None | N |
T/F | 0.2538 | likely_benign | 0.2314 | benign | -0.774 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
T/G | 0.2186 | likely_benign | 0.2015 | benign | -0.192 | Destabilizing | 0.993 | D | 0.673 | prob.neutral | None | None | None | None | N |
T/H | 0.2615 | likely_benign | 0.2515 | benign | -0.372 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
T/I | 0.2127 | likely_benign | 0.1989 | benign | -0.068 | Destabilizing | 0.999 | D | 0.735 | deleterious | N | 0.466071958 | None | None | N |
T/K | 0.2418 | likely_benign | 0.2414 | benign | -0.255 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.481960641 | None | None | N |
T/L | 0.1076 | likely_benign | 0.1007 | benign | -0.068 | Destabilizing | 0.993 | D | 0.651 | prob.neutral | None | None | None | None | N |
T/M | 0.0894 | likely_benign | 0.0887 | benign | -0.161 | Destabilizing | 1.0 | D | 0.698 | prob.delet. | None | None | None | None | N |
T/N | 0.1309 | likely_benign | 0.1223 | benign | -0.117 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
T/P | 0.1491 | likely_benign | 0.1303 | benign | -0.061 | Destabilizing | 0.999 | D | 0.735 | deleterious | N | 0.519748238 | None | None | N |
T/Q | 0.2322 | likely_benign | 0.232 | benign | -0.286 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/R | 0.1929 | likely_benign | 0.1933 | benign | -0.009 | Destabilizing | 0.999 | D | 0.727 | deleterious | N | 0.47074357 | None | None | N |
T/S | 0.1096 | likely_benign | 0.1015 | benign | -0.274 | Destabilizing | 0.983 | D | 0.503 | neutral | N | 0.469876778 | None | None | N |
T/V | 0.15 | likely_benign | 0.1434 | benign | -0.061 | Destabilizing | 0.993 | D | 0.497 | neutral | None | None | None | None | N |
T/W | 0.586 | likely_pathogenic | 0.5571 | ambiguous | -0.877 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
T/Y | 0.2884 | likely_benign | 0.2752 | benign | -0.542 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.