Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32308 | 97147;97148;97149 | chr2:178542932;178542931;178542930 | chr2:179407659;179407658;179407657 |
N2AB | 30667 | 92224;92225;92226 | chr2:178542932;178542931;178542930 | chr2:179407659;179407658;179407657 |
N2A | 29740 | 89443;89444;89445 | chr2:178542932;178542931;178542930 | chr2:179407659;179407658;179407657 |
N2B | 23243 | 69952;69953;69954 | chr2:178542932;178542931;178542930 | chr2:179407659;179407658;179407657 |
Novex-1 | 23368 | 70327;70328;70329 | chr2:178542932;178542931;178542930 | chr2:179407659;179407658;179407657 |
Novex-2 | 23435 | 70528;70529;70530 | chr2:178542932;178542931;178542930 | chr2:179407659;179407658;179407657 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.007 | N | 0.357 | 0.076 | 0.435915822735 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/R | rs749636019 | -0.683 | 0.879 | N | 0.728 | 0.477 | 0.838891562718 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.07E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.547 | ambiguous | 0.576 | pathogenic | -1.569 | Destabilizing | 0.575 | D | 0.554 | neutral | None | None | None | None | N |
L/C | 0.6867 | likely_pathogenic | 0.6771 | pathogenic | -0.818 | Destabilizing | 0.991 | D | 0.667 | neutral | None | None | None | None | N |
L/D | 0.9112 | likely_pathogenic | 0.9221 | pathogenic | -1.16 | Destabilizing | 0.906 | D | 0.749 | deleterious | None | None | None | None | N |
L/E | 0.7919 | likely_pathogenic | 0.8266 | pathogenic | -1.172 | Destabilizing | 0.906 | D | 0.743 | deleterious | None | None | None | None | N |
L/F | 0.1988 | likely_benign | 0.1858 | benign | -1.19 | Destabilizing | 0.007 | N | 0.357 | neutral | N | 0.472125729 | None | None | N |
L/G | 0.7489 | likely_pathogenic | 0.7643 | pathogenic | -1.882 | Destabilizing | 0.906 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/H | 0.5568 | ambiguous | 0.5855 | pathogenic | -1.21 | Destabilizing | 0.988 | D | 0.755 | deleterious | N | 0.488899242 | None | None | N |
L/I | 0.124 | likely_benign | 0.1279 | benign | -0.789 | Destabilizing | 0.003 | N | 0.286 | neutral | N | 0.483068983 | None | None | N |
L/K | 0.5983 | likely_pathogenic | 0.6663 | pathogenic | -1.12 | Destabilizing | 0.906 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/M | 0.1368 | likely_benign | 0.1538 | benign | -0.536 | Destabilizing | 0.826 | D | 0.591 | neutral | None | None | None | None | N |
L/N | 0.7276 | likely_pathogenic | 0.766 | pathogenic | -0.842 | Destabilizing | 0.967 | D | 0.748 | deleterious | None | None | None | None | N |
L/P | 0.5892 | likely_pathogenic | 0.6046 | pathogenic | -1.018 | Destabilizing | 0.957 | D | 0.749 | deleterious | N | 0.488899242 | None | None | N |
L/Q | 0.495 | ambiguous | 0.553 | ambiguous | -1.024 | Destabilizing | 0.967 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/R | 0.4899 | ambiguous | 0.5407 | ambiguous | -0.529 | Destabilizing | 0.879 | D | 0.728 | prob.delet. | N | 0.488645752 | None | None | N |
L/S | 0.6731 | likely_pathogenic | 0.7045 | pathogenic | -1.378 | Destabilizing | 0.906 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/T | 0.3307 | likely_benign | 0.363 | ambiguous | -1.273 | Destabilizing | 0.826 | D | 0.625 | neutral | None | None | None | None | N |
L/V | 0.135 | likely_benign | 0.1391 | benign | -1.018 | Destabilizing | 0.013 | N | 0.371 | neutral | N | 0.485096899 | None | None | N |
L/W | 0.4415 | ambiguous | 0.4271 | ambiguous | -1.279 | Destabilizing | 0.991 | D | 0.744 | deleterious | None | None | None | None | N |
L/Y | 0.5796 | likely_pathogenic | 0.5828 | pathogenic | -1.065 | Destabilizing | 0.704 | D | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.