Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3231 | 9916;9917;9918 | chr2:178766393;178766392;178766391 | chr2:179631120;179631119;179631118 |
N2AB | 3231 | 9916;9917;9918 | chr2:178766393;178766392;178766391 | chr2:179631120;179631119;179631118 |
N2A | 3231 | 9916;9917;9918 | chr2:178766393;178766392;178766391 | chr2:179631120;179631119;179631118 |
N2B | 3185 | 9778;9779;9780 | chr2:178766393;178766392;178766391 | chr2:179631120;179631119;179631118 |
Novex-1 | 3185 | 9778;9779;9780 | chr2:178766393;178766392;178766391 | chr2:179631120;179631119;179631118 |
Novex-2 | 3185 | 9778;9779;9780 | chr2:178766393;178766392;178766391 | chr2:179631120;179631119;179631118 |
Novex-3 | 3231 | 9916;9917;9918 | chr2:178766393;178766392;178766391 | chr2:179631120;179631119;179631118 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs786205404 | None | 1.0 | N | 0.74 | 0.353 | 0.467839254973 | gnomAD-4.0.0 | 1.37231E-06 | None | None | None | None | N | None | 0 | 2.23674E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66041E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9051 | likely_pathogenic | 0.9774 | pathogenic | -2.67 | Highly Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
L/C | 0.928 | likely_pathogenic | 0.9703 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9998 | pathogenic | -3.171 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/E | 0.9927 | likely_pathogenic | 0.999 | pathogenic | -2.885 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/F | 0.715 | likely_pathogenic | 0.8871 | pathogenic | -1.578 | Destabilizing | 1.0 | D | 0.74 | deleterious | N | 0.462644014 | None | None | N |
L/G | 0.9883 | likely_pathogenic | 0.9974 | pathogenic | -3.27 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/H | 0.9775 | likely_pathogenic | 0.9977 | pathogenic | -2.835 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.466031929 | None | None | N |
L/I | 0.2556 | likely_benign | 0.3093 | benign | -0.897 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.424485033 | None | None | N |
L/K | 0.9841 | likely_pathogenic | 0.9981 | pathogenic | -2.024 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/M | 0.4091 | ambiguous | 0.6218 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
L/N | 0.9922 | likely_pathogenic | 0.9987 | pathogenic | -2.562 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/P | 0.9964 | likely_pathogenic | 0.9988 | pathogenic | -1.474 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.466031929 | None | None | N |
L/Q | 0.965 | likely_pathogenic | 0.9961 | pathogenic | -2.308 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/R | 0.9605 | likely_pathogenic | 0.9943 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.465617395 | None | None | N |
L/S | 0.9799 | likely_pathogenic | 0.9976 | pathogenic | -3.224 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/T | 0.9384 | likely_pathogenic | 0.9891 | pathogenic | -2.779 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/V | 0.2984 | likely_benign | 0.3946 | ambiguous | -1.474 | Destabilizing | 0.999 | D | 0.51 | neutral | N | 0.382163518 | None | None | N |
L/W | 0.9619 | likely_pathogenic | 0.994 | pathogenic | -2.034 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/Y | 0.9602 | likely_pathogenic | 0.9927 | pathogenic | -1.741 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.