Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32313 | 97162;97163;97164 | chr2:178542917;178542916;178542915 | chr2:179407644;179407643;179407642 |
N2AB | 30672 | 92239;92240;92241 | chr2:178542917;178542916;178542915 | chr2:179407644;179407643;179407642 |
N2A | 29745 | 89458;89459;89460 | chr2:178542917;178542916;178542915 | chr2:179407644;179407643;179407642 |
N2B | 23248 | 69967;69968;69969 | chr2:178542917;178542916;178542915 | chr2:179407644;179407643;179407642 |
Novex-1 | 23373 | 70342;70343;70344 | chr2:178542917;178542916;178542915 | chr2:179407644;179407643;179407642 |
Novex-2 | 23440 | 70543;70544;70545 | chr2:178542917;178542916;178542915 | chr2:179407644;179407643;179407642 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.684 | N | 0.427 | 0.191 | 0.340992353424 | gnomAD-4.0.0 | 6.85262E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65887E-05 |
Q/R | None | None | 0.684 | N | 0.455 | 0.114 | 0.101711395817 | gnomAD-4.0.0 | 6.85262E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00961E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2437 | likely_benign | 0.2476 | benign | -0.057 | Destabilizing | 0.742 | D | 0.383 | neutral | None | None | None | None | I |
Q/C | 0.8431 | likely_pathogenic | 0.7883 | pathogenic | -0.092 | Destabilizing | 0.996 | D | 0.471 | neutral | None | None | None | None | I |
Q/D | 0.5135 | ambiguous | 0.4047 | ambiguous | -0.119 | Destabilizing | 0.742 | D | 0.371 | neutral | None | None | None | None | I |
Q/E | 0.1446 | likely_benign | 0.1097 | benign | -0.171 | Destabilizing | 0.472 | N | 0.371 | neutral | N | 0.481104131 | None | None | I |
Q/F | 0.7999 | likely_pathogenic | 0.7535 | pathogenic | -0.458 | Destabilizing | 0.953 | D | 0.44 | neutral | None | None | None | None | I |
Q/G | 0.2134 | likely_benign | 0.2001 | benign | -0.167 | Destabilizing | 0.742 | D | 0.413 | neutral | None | None | None | None | I |
Q/H | 0.4103 | ambiguous | 0.3021 | benign | 0.026 | Stabilizing | 0.015 | N | 0.261 | neutral | N | 0.492225202 | None | None | I |
Q/I | 0.6126 | likely_pathogenic | 0.5652 | pathogenic | 0.135 | Stabilizing | 0.953 | D | 0.441 | neutral | None | None | None | None | I |
Q/K | 0.2177 | likely_benign | 0.1483 | benign | -0.005 | Destabilizing | 0.684 | D | 0.422 | neutral | N | 0.436121203 | None | None | I |
Q/L | 0.1921 | likely_benign | 0.1668 | benign | 0.135 | Stabilizing | 0.684 | D | 0.427 | neutral | N | 0.457490979 | None | None | I |
Q/M | 0.43 | ambiguous | 0.4188 | ambiguous | 0.093 | Stabilizing | 0.984 | D | 0.351 | neutral | None | None | None | None | I |
Q/N | 0.3126 | likely_benign | 0.2877 | benign | -0.282 | Destabilizing | 0.742 | D | 0.398 | neutral | None | None | None | None | I |
Q/P | 0.2383 | likely_benign | 0.194 | benign | 0.095 | Stabilizing | 0.007 | N | 0.218 | neutral | N | 0.457837696 | None | None | I |
Q/R | 0.2265 | likely_benign | 0.1474 | benign | 0.183 | Stabilizing | 0.684 | D | 0.455 | neutral | N | 0.439622868 | None | None | I |
Q/S | 0.2441 | likely_benign | 0.2525 | benign | -0.245 | Destabilizing | 0.742 | D | 0.388 | neutral | None | None | None | None | I |
Q/T | 0.3077 | likely_benign | 0.283 | benign | -0.173 | Destabilizing | 0.854 | D | 0.419 | neutral | None | None | None | None | I |
Q/V | 0.377 | ambiguous | 0.3499 | ambiguous | 0.095 | Stabilizing | 0.953 | D | 0.415 | neutral | None | None | None | None | I |
Q/W | 0.7764 | likely_pathogenic | 0.6413 | pathogenic | -0.542 | Destabilizing | 0.996 | D | 0.476 | neutral | None | None | None | None | I |
Q/Y | 0.6453 | likely_pathogenic | 0.5412 | ambiguous | -0.244 | Destabilizing | 0.835 | D | 0.417 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.