Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32315 | 97168;97169;97170 | chr2:178542911;178542910;178542909 | chr2:179407638;179407637;179407636 |
N2AB | 30674 | 92245;92246;92247 | chr2:178542911;178542910;178542909 | chr2:179407638;179407637;179407636 |
N2A | 29747 | 89464;89465;89466 | chr2:178542911;178542910;178542909 | chr2:179407638;179407637;179407636 |
N2B | 23250 | 69973;69974;69975 | chr2:178542911;178542910;178542909 | chr2:179407638;179407637;179407636 |
Novex-1 | 23375 | 70348;70349;70350 | chr2:178542911;178542910;178542909 | chr2:179407638;179407637;179407636 |
Novex-2 | 23442 | 70549;70550;70551 | chr2:178542911;178542910;178542909 | chr2:179407638;179407637;179407636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1363712214 | -0.569 | 0.826 | N | 0.288 | 0.081 | 0.152612264143 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1363712214 | -0.569 | 0.826 | N | 0.288 | 0.081 | 0.152612264143 | gnomAD-4.0.0 | 1.5955E-06 | None | None | None | None | N | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs56027402 | 0.33 | 0.061 | N | 0.173 | 0.126 | None | gnomAD-2.1.1 | 6.00651E-03 | None | None | None | None | N | None | 6.4336E-02 | 2.40698E-03 | None | 0 | 0 | None | 2.29223E-04 | None | 0 | 1.33894E-04 | 1.5493E-03 |
T/I | rs56027402 | 0.33 | 0.061 | N | 0.173 | 0.126 | None | gnomAD-3.1.2 | 1.79995E-02 | None | None | None | None | N | None | 6.32037E-02 | 4.9823E-03 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 2.49934E-04 | 6.21375E-04 | 1.14833E-02 |
T/I | rs56027402 | 0.33 | 0.061 | N | 0.173 | 0.126 | None | 1000 genomes | 1.63738E-02 | None | None | None | None | N | None | 5.75E-02 | 8.6E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
T/I | rs56027402 | 0.33 | 0.061 | N | 0.173 | 0.126 | None | gnomAD-4.0.0 | 3.40756E-03 | None | None | None | None | N | None | 6.51298E-02 | 3.36902E-03 | None | 0 | 0 | None | 0 | 1.81758E-03 | 7.46826E-05 | 2.1979E-04 | 4.64476E-03 |
T/N | rs56027402 | None | 0.996 | N | 0.314 | 0.234 | 0.282179105231 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
T/N | rs56027402 | None | 0.996 | N | 0.314 | 0.234 | 0.282179105231 | gnomAD-4.0.0 | 3.72233E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.49451E-05 | 1.6022E-05 |
T/S | None | None | 0.959 | N | 0.298 | 0.12 | 0.143124449307 | gnomAD-4.0.0 | 1.5955E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02847E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1329 | likely_benign | 0.1215 | benign | -0.803 | Destabilizing | 0.826 | D | 0.288 | neutral | N | 0.481797565 | None | None | N |
T/C | 0.5063 | ambiguous | 0.5026 | ambiguous | -0.418 | Destabilizing | 0.999 | D | 0.327 | neutral | None | None | None | None | N |
T/D | 0.6842 | likely_pathogenic | 0.5656 | pathogenic | -0.635 | Destabilizing | 0.997 | D | 0.331 | neutral | None | None | None | None | N |
T/E | 0.44 | ambiguous | 0.3691 | ambiguous | -0.569 | Destabilizing | 0.997 | D | 0.333 | neutral | None | None | None | None | N |
T/F | 0.4041 | ambiguous | 0.314 | benign | -0.517 | Destabilizing | 0.991 | D | 0.395 | neutral | None | None | None | None | N |
T/G | 0.4796 | ambiguous | 0.4447 | ambiguous | -1.141 | Destabilizing | 0.99 | D | 0.385 | neutral | None | None | None | None | N |
T/H | 0.4274 | ambiguous | 0.3486 | ambiguous | -1.449 | Destabilizing | 0.999 | D | 0.391 | neutral | None | None | None | None | N |
T/I | 0.1646 | likely_benign | 0.1219 | benign | 0.035 | Stabilizing | 0.061 | N | 0.173 | neutral | N | 0.477295822 | None | None | N |
T/K | 0.4268 | ambiguous | 0.3382 | benign | -1.011 | Destabilizing | 0.997 | D | 0.325 | neutral | None | None | None | None | N |
T/L | 0.1352 | likely_benign | 0.1033 | benign | 0.035 | Stabilizing | 0.579 | D | 0.276 | neutral | None | None | None | None | N |
T/M | 0.0915 | likely_benign | 0.0808 | benign | 0.207 | Stabilizing | 0.991 | D | 0.321 | neutral | None | None | None | None | N |
T/N | 0.2023 | likely_benign | 0.1706 | benign | -1.036 | Destabilizing | 0.996 | D | 0.314 | neutral | N | 0.442372385 | None | None | N |
T/P | 0.6623 | likely_pathogenic | 0.52 | ambiguous | -0.211 | Destabilizing | 0.996 | D | 0.336 | neutral | N | 0.471868573 | None | None | N |
T/Q | 0.3174 | likely_benign | 0.2784 | benign | -1.005 | Destabilizing | 0.997 | D | 0.321 | neutral | None | None | None | None | N |
T/R | 0.3846 | ambiguous | 0.2784 | benign | -0.961 | Destabilizing | 0.997 | D | 0.324 | neutral | None | None | None | None | N |
T/S | 0.192 | likely_benign | 0.1775 | benign | -1.236 | Destabilizing | 0.959 | D | 0.298 | neutral | N | 0.449914433 | None | None | N |
T/V | 0.1277 | likely_benign | 0.1082 | benign | -0.211 | Destabilizing | 0.079 | N | 0.133 | neutral | None | None | None | None | N |
T/W | 0.7652 | likely_pathogenic | 0.7014 | pathogenic | -0.591 | Destabilizing | 0.999 | D | 0.447 | neutral | None | None | None | None | N |
T/Y | 0.4089 | ambiguous | 0.3501 | ambiguous | -0.361 | Destabilizing | 0.997 | D | 0.392 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.