Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32321 | 97186;97187;97188 | chr2:178542893;178542892;178542891 | chr2:179407620;179407619;179407618 |
N2AB | 30680 | 92263;92264;92265 | chr2:178542893;178542892;178542891 | chr2:179407620;179407619;179407618 |
N2A | 29753 | 89482;89483;89484 | chr2:178542893;178542892;178542891 | chr2:179407620;179407619;179407618 |
N2B | 23256 | 69991;69992;69993 | chr2:178542893;178542892;178542891 | chr2:179407620;179407619;179407618 |
Novex-1 | 23381 | 70366;70367;70368 | chr2:178542893;178542892;178542891 | chr2:179407620;179407619;179407618 |
Novex-2 | 23448 | 70567;70568;70569 | chr2:178542893;178542892;178542891 | chr2:179407620;179407619;179407618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1421966339 | -0.946 | 1.0 | D | 0.879 | 0.736 | 0.607940206691 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/D | rs1421966339 | -0.946 | 1.0 | D | 0.879 | 0.736 | 0.607940206691 | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.6094 | likely_pathogenic | 0.5693 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.590394257 | None | None | N |
G/C | 0.6857 | likely_pathogenic | 0.6497 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.616537782 | None | None | N |
G/D | 0.6807 | likely_pathogenic | 0.6627 | pathogenic | -1.239 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.582047048 | None | None | N |
G/E | 0.7544 | likely_pathogenic | 0.7235 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
G/F | 0.9432 | likely_pathogenic | 0.9314 | pathogenic | -1.28 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
G/H | 0.7864 | likely_pathogenic | 0.7678 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/I | 0.9593 | likely_pathogenic | 0.9433 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
G/K | 0.8154 | likely_pathogenic | 0.7904 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/L | 0.8885 | likely_pathogenic | 0.8662 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
G/M | 0.9173 | likely_pathogenic | 0.9008 | pathogenic | -0.42 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
G/N | 0.5935 | likely_pathogenic | 0.6022 | pathogenic | -0.852 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
G/P | 0.9948 | likely_pathogenic | 0.992 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
G/Q | 0.7079 | likely_pathogenic | 0.6805 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
G/R | 0.7024 | likely_pathogenic | 0.6483 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.590596061 | None | None | N |
G/S | 0.3253 | likely_benign | 0.3094 | benign | -0.975 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.583459678 | None | None | N |
G/T | 0.7503 | likely_pathogenic | 0.7088 | pathogenic | -1.063 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
G/V | 0.9128 | likely_pathogenic | 0.879 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.616335977 | None | None | N |
G/W | 0.8913 | likely_pathogenic | 0.8553 | pathogenic | -1.468 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
G/Y | 0.8892 | likely_pathogenic | 0.8683 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.