Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32323 | 97192;97193;97194 | chr2:178542887;178542886;178542885 | chr2:179407614;179407613;179407612 |
N2AB | 30682 | 92269;92270;92271 | chr2:178542887;178542886;178542885 | chr2:179407614;179407613;179407612 |
N2A | 29755 | 89488;89489;89490 | chr2:178542887;178542886;178542885 | chr2:179407614;179407613;179407612 |
N2B | 23258 | 69997;69998;69999 | chr2:178542887;178542886;178542885 | chr2:179407614;179407613;179407612 |
Novex-1 | 23383 | 70372;70373;70374 | chr2:178542887;178542886;178542885 | chr2:179407614;179407613;179407612 |
Novex-2 | 23450 | 70573;70574;70575 | chr2:178542887;178542886;178542885 | chr2:179407614;179407613;179407612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1695272344 | None | 0.999 | N | 0.781 | 0.356 | 0.506311303838 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1695272344 | None | 0.999 | N | 0.781 | 0.356 | 0.506311303838 | gnomAD-4.0.0 | 6.57341E-06 | None | None | None | None | N | None | 0 | 6.54879E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0963 | likely_benign | 0.0935 | benign | -1.441 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | N | 0.473255439 | None | None | N |
P/C | 0.6732 | likely_pathogenic | 0.6056 | pathogenic | -0.975 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
P/D | 0.6379 | likely_pathogenic | 0.5836 | pathogenic | -1.31 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
P/E | 0.5164 | ambiguous | 0.4714 | ambiguous | -1.347 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
P/F | 0.708 | likely_pathogenic | 0.6388 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
P/G | 0.3884 | ambiguous | 0.3783 | ambiguous | -1.723 | Destabilizing | 0.997 | D | 0.697 | prob.neutral | None | None | None | None | N |
P/H | 0.377 | ambiguous | 0.3064 | benign | -1.237 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
P/I | 0.4969 | ambiguous | 0.449 | ambiguous | -0.781 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/K | 0.5395 | ambiguous | 0.472 | ambiguous | -1.201 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
P/L | 0.2235 | likely_benign | 0.1831 | benign | -0.781 | Destabilizing | 0.999 | D | 0.781 | deleterious | N | 0.455945604 | None | None | N |
P/M | 0.4347 | ambiguous | 0.3857 | ambiguous | -0.556 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
P/N | 0.4274 | ambiguous | 0.3871 | ambiguous | -0.926 | Destabilizing | 0.91 | D | 0.427 | neutral | None | None | None | None | N |
P/Q | 0.3177 | likely_benign | 0.2835 | benign | -1.162 | Destabilizing | 0.999 | D | 0.797 | deleterious | N | 0.488147534 | None | None | N |
P/R | 0.3887 | ambiguous | 0.3236 | benign | -0.613 | Destabilizing | 0.999 | D | 0.773 | deleterious | N | 0.465540033 | None | None | N |
P/S | 0.1837 | likely_benign | 0.1687 | benign | -1.413 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | N | 0.44344982 | None | None | N |
P/T | 0.1545 | likely_benign | 0.1329 | benign | -1.347 | Destabilizing | 0.999 | D | 0.762 | deleterious | N | 0.402949992 | None | None | N |
P/V | 0.3162 | likely_benign | 0.2921 | benign | -0.966 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
P/W | 0.839 | likely_pathogenic | 0.7838 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
P/Y | 0.6852 | likely_pathogenic | 0.6081 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.