Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32325 | 97198;97199;97200 | chr2:178542881;178542880;178542879 | chr2:179407608;179407607;179407606 |
N2AB | 30684 | 92275;92276;92277 | chr2:178542881;178542880;178542879 | chr2:179407608;179407607;179407606 |
N2A | 29757 | 89494;89495;89496 | chr2:178542881;178542880;178542879 | chr2:179407608;179407607;179407606 |
N2B | 23260 | 70003;70004;70005 | chr2:178542881;178542880;178542879 | chr2:179407608;179407607;179407606 |
Novex-1 | 23385 | 70378;70379;70380 | chr2:178542881;178542880;178542879 | chr2:179407608;179407607;179407606 |
Novex-2 | 23452 | 70579;70580;70581 | chr2:178542881;178542880;178542879 | chr2:179407608;179407607;179407606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1196060333 | -0.087 | 0.994 | N | 0.598 | 0.208 | 0.19670166235 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
E/Q | rs1196060333 | -0.087 | 0.994 | N | 0.598 | 0.208 | 0.19670166235 | gnomAD-4.0.0 | 2.7371E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59831E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2251 | likely_benign | 0.2069 | benign | -0.596 | Destabilizing | 0.961 | D | 0.594 | neutral | N | 0.488974253 | None | None | N |
E/C | 0.8658 | likely_pathogenic | 0.8569 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/D | 0.1981 | likely_benign | 0.1836 | benign | -0.797 | Destabilizing | 0.031 | N | 0.248 | neutral | N | 0.508349448 | None | None | N |
E/F | 0.8125 | likely_pathogenic | 0.7857 | pathogenic | -0.006 | Destabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/G | 0.3689 | ambiguous | 0.3406 | ambiguous | -0.922 | Destabilizing | 0.98 | D | 0.601 | neutral | N | 0.459161608 | None | None | N |
E/H | 0.5035 | ambiguous | 0.4575 | ambiguous | -0.033 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | N |
E/I | 0.3852 | ambiguous | 0.3606 | ambiguous | 0.279 | Stabilizing | 0.983 | D | 0.651 | neutral | None | None | None | None | N |
E/K | 0.2957 | likely_benign | 0.2657 | benign | -0.232 | Destabilizing | 0.98 | D | 0.588 | neutral | N | 0.45093594 | None | None | N |
E/L | 0.4886 | ambiguous | 0.4484 | ambiguous | 0.279 | Stabilizing | 0.942 | D | 0.617 | neutral | None | None | None | None | N |
E/M | 0.5096 | ambiguous | 0.4742 | ambiguous | 0.459 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/N | 0.3331 | likely_benign | 0.3112 | benign | -0.769 | Destabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
E/P | 0.8813 | likely_pathogenic | 0.8702 | pathogenic | 0.009 | Stabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/Q | 0.1575 | likely_benign | 0.1489 | benign | -0.643 | Destabilizing | 0.994 | D | 0.598 | neutral | N | 0.476045028 | None | None | N |
E/R | 0.4134 | ambiguous | 0.3828 | ambiguous | 0.121 | Stabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | N |
E/S | 0.2333 | likely_benign | 0.2116 | benign | -0.996 | Destabilizing | 0.97 | D | 0.562 | neutral | None | None | None | None | N |
E/T | 0.2017 | likely_benign | 0.1984 | benign | -0.724 | Destabilizing | 0.97 | D | 0.599 | neutral | None | None | None | None | N |
E/V | 0.2258 | likely_benign | 0.2109 | benign | 0.009 | Stabilizing | 0.433 | N | 0.452 | neutral | N | 0.44989579 | None | None | N |
E/W | 0.9496 | likely_pathogenic | 0.934 | pathogenic | 0.258 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/Y | 0.7521 | likely_pathogenic | 0.7004 | pathogenic | 0.254 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.