Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3233 | 9922;9923;9924 | chr2:178766387;178766386;178766385 | chr2:179631114;179631113;179631112 |
N2AB | 3233 | 9922;9923;9924 | chr2:178766387;178766386;178766385 | chr2:179631114;179631113;179631112 |
N2A | 3233 | 9922;9923;9924 | chr2:178766387;178766386;178766385 | chr2:179631114;179631113;179631112 |
N2B | 3187 | 9784;9785;9786 | chr2:178766387;178766386;178766385 | chr2:179631114;179631113;179631112 |
Novex-1 | 3187 | 9784;9785;9786 | chr2:178766387;178766386;178766385 | chr2:179631114;179631113;179631112 |
Novex-2 | 3187 | 9784;9785;9786 | chr2:178766387;178766386;178766385 | chr2:179631114;179631113;179631112 |
Novex-3 | 3233 | 9922;9923;9924 | chr2:178766387;178766386;178766385 | chr2:179631114;179631113;179631112 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.451 | 0.268 | 0.419713421852 | gnomAD-4.0.0 | 1.37494E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9059 | likely_pathogenic | 0.9702 | pathogenic | -1.864 | Destabilizing | 0.999 | D | 0.434 | neutral | N | 0.480350036 | None | None | N |
V/C | 0.9736 | likely_pathogenic | 0.9877 | pathogenic | -1.68 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
V/D | 0.9973 | likely_pathogenic | 0.9991 | pathogenic | -2.763 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.482565157 | None | None | N |
V/E | 0.9888 | likely_pathogenic | 0.996 | pathogenic | -2.713 | Highly Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/F | 0.9016 | likely_pathogenic | 0.9817 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.482342171 | None | None | N |
V/G | 0.9466 | likely_pathogenic | 0.9795 | pathogenic | -2.208 | Highly Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.482565157 | None | None | N |
V/H | 0.9975 | likely_pathogenic | 0.9992 | pathogenic | -1.689 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/I | 0.1263 | likely_benign | 0.1724 | benign | -0.976 | Destabilizing | 0.997 | D | 0.451 | neutral | N | 0.399428329 | None | None | N |
V/K | 0.9906 | likely_pathogenic | 0.9961 | pathogenic | -1.568 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/L | 0.743 | likely_pathogenic | 0.9109 | pathogenic | -0.976 | Destabilizing | 0.997 | D | 0.456 | neutral | N | 0.435439974 | None | None | N |
V/M | 0.7849 | likely_pathogenic | 0.9498 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
V/N | 0.9918 | likely_pathogenic | 0.9967 | pathogenic | -1.636 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/P | 0.993 | likely_pathogenic | 0.9951 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/Q | 0.9874 | likely_pathogenic | 0.9963 | pathogenic | -1.805 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/R | 0.9814 | likely_pathogenic | 0.9912 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/S | 0.9706 | likely_pathogenic | 0.9888 | pathogenic | -2.08 | Highly Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/T | 0.9162 | likely_pathogenic | 0.957 | pathogenic | -1.929 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
V/W | 0.998 | likely_pathogenic | 0.9996 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/Y | 0.9938 | likely_pathogenic | 0.9984 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.