Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32341 | 97246;97247;97248 | chr2:178542833;178542832;178542831 | chr2:179407560;179407559;179407558 |
N2AB | 30700 | 92323;92324;92325 | chr2:178542833;178542832;178542831 | chr2:179407560;179407559;179407558 |
N2A | 29773 | 89542;89543;89544 | chr2:178542833;178542832;178542831 | chr2:179407560;179407559;179407558 |
N2B | 23276 | 70051;70052;70053 | chr2:178542833;178542832;178542831 | chr2:179407560;179407559;179407558 |
Novex-1 | 23401 | 70426;70427;70428 | chr2:178542833;178542832;178542831 | chr2:179407560;179407559;179407558 |
Novex-2 | 23468 | 70627;70628;70629 | chr2:178542833;178542832;178542831 | chr2:179407560;179407559;179407558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.961 | N | 0.495 | 0.283 | 0.422404719673 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6025 | likely_pathogenic | 0.5043 | ambiguous | -2.301 | Highly Destabilizing | 0.942 | D | 0.575 | neutral | None | None | None | None | N |
F/C | 0.2965 | likely_benign | 0.2395 | benign | -1.362 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.516163641 | None | None | N |
F/D | 0.8511 | likely_pathogenic | 0.7904 | pathogenic | -0.909 | Destabilizing | 0.991 | D | 0.706 | prob.neutral | None | None | None | None | N |
F/E | 0.8345 | likely_pathogenic | 0.776 | pathogenic | -0.818 | Destabilizing | 0.991 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/G | 0.7689 | likely_pathogenic | 0.6883 | pathogenic | -2.634 | Highly Destabilizing | 0.97 | D | 0.647 | neutral | None | None | None | None | N |
F/H | 0.3645 | ambiguous | 0.3109 | benign | -0.915 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
F/I | 0.2914 | likely_benign | 0.2356 | benign | -1.294 | Destabilizing | 0.98 | D | 0.525 | neutral | N | 0.450304009 | None | None | N |
F/K | 0.7541 | likely_pathogenic | 0.678 | pathogenic | -1.077 | Destabilizing | 0.991 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/L | 0.8135 | likely_pathogenic | 0.7589 | pathogenic | -1.294 | Destabilizing | 0.961 | D | 0.495 | neutral | N | 0.393543862 | None | None | N |
F/M | 0.5174 | ambiguous | 0.4734 | ambiguous | -1.09 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | N |
F/N | 0.4773 | ambiguous | 0.4223 | ambiguous | -1.046 | Destabilizing | 0.991 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/P | 0.998 | likely_pathogenic | 0.9962 | pathogenic | -1.624 | Destabilizing | 0.996 | D | 0.74 | deleterious | None | None | None | None | N |
F/Q | 0.6718 | likely_pathogenic | 0.5783 | pathogenic | -1.177 | Destabilizing | 0.996 | D | 0.742 | deleterious | None | None | None | None | N |
F/R | 0.6405 | likely_pathogenic | 0.5327 | ambiguous | -0.424 | Destabilizing | 0.996 | D | 0.734 | prob.delet. | None | None | None | None | N |
F/S | 0.3421 | ambiguous | 0.2742 | benign | -1.952 | Destabilizing | 0.489 | N | 0.371 | neutral | N | 0.422733405 | None | None | N |
F/T | 0.4685 | ambiguous | 0.4071 | ambiguous | -1.769 | Destabilizing | 0.942 | D | 0.621 | neutral | None | None | None | None | N |
F/V | 0.281 | likely_benign | 0.2291 | benign | -1.624 | Destabilizing | 0.961 | D | 0.554 | neutral | N | 0.466734899 | None | None | N |
F/W | 0.4341 | ambiguous | 0.3893 | ambiguous | -0.413 | Destabilizing | 1.0 | D | 0.546 | neutral | None | None | None | None | N |
F/Y | 0.0795 | likely_benign | 0.0786 | benign | -0.589 | Destabilizing | 0.248 | N | 0.347 | neutral | N | 0.394005222 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.