Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 32347 | 97264;97265;97266 | chr2:178542815;178542814;178542813 | chr2:179407542;179407541;179407540 |
N2AB | 30706 | 92341;92342;92343 | chr2:178542815;178542814;178542813 | chr2:179407542;179407541;179407540 |
N2A | 29779 | 89560;89561;89562 | chr2:178542815;178542814;178542813 | chr2:179407542;179407541;179407540 |
N2B | 23282 | 70069;70070;70071 | chr2:178542815;178542814;178542813 | chr2:179407542;179407541;179407540 |
Novex-1 | 23407 | 70444;70445;70446 | chr2:178542815;178542814;178542813 | chr2:179407542;179407541;179407540 |
Novex-2 | 23474 | 70645;70646;70647 | chr2:178542815;178542814;178542813 | chr2:179407542;179407541;179407540 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.17 | N | 0.377 | 0.162 | 0.381580015636 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7906 | likely_pathogenic | 0.7121 | pathogenic | -1.926 | Destabilizing | 0.953 | D | 0.495 | neutral | None | None | None | None | N |
L/C | 0.8517 | likely_pathogenic | 0.7778 | pathogenic | -1.203 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
L/D | 0.9875 | likely_pathogenic | 0.9803 | pathogenic | -1.674 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
L/E | 0.9186 | likely_pathogenic | 0.8817 | pathogenic | -1.459 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
L/F | 0.4334 | ambiguous | 0.325 | benign | -1.122 | Destabilizing | 0.986 | D | 0.573 | neutral | None | None | None | None | N |
L/G | 0.9425 | likely_pathogenic | 0.9071 | pathogenic | -2.403 | Highly Destabilizing | 0.993 | D | 0.747 | deleterious | None | None | None | None | N |
L/H | 0.8673 | likely_pathogenic | 0.7938 | pathogenic | -1.598 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
L/I | 0.1076 | likely_benign | 0.1013 | benign | -0.565 | Destabilizing | 0.06 | N | 0.398 | neutral | None | None | None | None | N |
L/K | 0.8537 | likely_pathogenic | 0.8054 | pathogenic | -1.288 | Destabilizing | 0.993 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/M | 0.2014 | likely_benign | 0.1637 | benign | -0.587 | Destabilizing | 0.76 | D | 0.455 | neutral | N | 0.512544267 | None | None | N |
L/N | 0.9314 | likely_pathogenic | 0.9056 | pathogenic | -1.653 | Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
L/P | 0.848 | likely_pathogenic | 0.7854 | pathogenic | -0.998 | Destabilizing | 0.997 | D | 0.781 | deleterious | D | 0.536270836 | None | None | N |
L/Q | 0.7551 | likely_pathogenic | 0.651 | pathogenic | -1.48 | Destabilizing | 0.991 | D | 0.744 | deleterious | D | 0.536524326 | None | None | N |
L/R | 0.8221 | likely_pathogenic | 0.7404 | pathogenic | -1.142 | Destabilizing | 0.991 | D | 0.744 | deleterious | D | 0.536270836 | None | None | N |
L/S | 0.9298 | likely_pathogenic | 0.8868 | pathogenic | -2.349 | Highly Destabilizing | 0.993 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/T | 0.7982 | likely_pathogenic | 0.7201 | pathogenic | -1.978 | Destabilizing | 0.986 | D | 0.606 | neutral | None | None | None | None | N |
L/V | 0.1578 | likely_benign | 0.1375 | benign | -0.998 | Destabilizing | 0.17 | N | 0.377 | neutral | N | 0.517055516 | None | None | N |
L/W | 0.7309 | likely_pathogenic | 0.5978 | pathogenic | -1.336 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/Y | 0.8023 | likely_pathogenic | 0.7037 | pathogenic | -1.029 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.